RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 ZNF260Q3ZCT1 412 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 DNM1P46Q6ZS02 220 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 TGIF2LYQ8IUE0 185 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 MFSD4AQ8N468 514 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 ZNF561Q8N587 486 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 ST8SIA4Q92187 359 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 FAM234AQ9H0X4 552 aa16.93■□□□□ 0.3
PTPA-208ENST00000411917 CHD3Q12873 2000 aaKnown RBP16.92■□□□□ 0.3
PTPA-208ENST00000411917 DYSFO75923 2080 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 IGKV1D-17A0A075B6S4 117 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 RFPL4AA6NLU0 287 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 RFPL4AL1F8VTS6 287 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 SULT1C2O00338 296 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 SOCS1O15524 211 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 OR2H2O95918 312 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 DNASE1P24855 282 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 PRDX2P32119 198 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 PDLIM4P50479 330 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 TAS2R20P59543 309 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 IKZF1Q13422 519 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 RBM39Q14498 530 aaKnown RBP16.92■□□□□ 0.3
PTPA-208ENST00000411917 C11orf91Q3C1V1 193 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 PLAC9Q5JTB6 97 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 ZNF788Q6ZQV5 615 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 DCDC5Q6ZRR9 648 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 Q6ZTK2 550 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 PPP1R35Q8TAP8 253 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 TSC22D3Q99576 134 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 LIME1Q9H400 295 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 NCOR1P1Q9H4R4 102 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 SCPEP1Q9HB40 452 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 TMEM165Q9HC07 324 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 DCAF16Q9NXF7 216 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 IL36RNQ9UBH0 155 aa16.92■□□□□ 0.3
PTPA-208ENST00000411917 TRAV24A0A0B4J272 114 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 DEGS1O15121 323 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 SIGLEC5O15389 551 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 ZNF737O75373 536 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 HLA-DQB1P01920 261 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 GABRR1P24046 479 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 CD40LGP29965 261 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 CD80P33681 288 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 KRTAP10-9P60411 292 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 MOGAT2Q3SYC2 334 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 GAPTQ8N292 157 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 GDPD1Q8N9F7 314 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 MED30Q96HR3 178 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 RIMS4Q9H426 269 aaPredicted RBP16.91■□□□□ 0.3
PTPA-208ENST00000411917 ZNF665Q9H7R5 613 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 AUNIPQ9H7T9 357 aa16.91■□□□□ 0.3
PTPA-208ENST00000411917 NKX6-3A6NJ46 265 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 SLC33A1O00400 549 aaPredicted RBP16.9■□□□□ 0.3
PTPA-208ENST00000411917 GSTZ1O43708 216 aaPredicted RBP16.9■□□□□ 0.3
PTPA-208ENST00000411917 ATP5J2P56134 94 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 SSBP1Q04837 148 aaKnown RBP16.9■□□□□ 0.3
PTPA-208ENST00000411917 ZMYND11Q15326 602 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 DEFB113Q30KQ7 82 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 HACD4Q5VWC8 232 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 PRSS57Q6UWY2 283 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 SLC36A1Q7Z2H8 476 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 SPICQ8N5J4 248 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 CD177Q8N6Q3 437 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 ARHGAP5-AS1Q96IT6 56 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 SNX22Q96L94 193 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 PECRQ9BY49 303 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 PLEKHJ1Q9NW61 149 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 TACC2O95359 2948 aa16.9■□□□□ 0.3
PTPA-208ENST00000411917 TRAV18A0A075B6X5 111 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 MCRIP1C9JLW8 97 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 C3orf80F5H4A9 247 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 H7C1Q1 480 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 GPR37O15354 613 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 NDUFS7O75251 213 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 ZNF44P15621 663 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 ZNF846Q147U1 533 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 SRSF7Q16629 238 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPA-208ENST00000411917 CDNFQ49AH0 187 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 FAM131AQ6UXB0 335 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 OR5D13Q8NGL4 314 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 DPCDQ9BVM2 203 aaPredicted RBP16.89■□□□□ 0.29
PTPA-208ENST00000411917 KCNK7Q9Y2U2 307 aa16.89■□□□□ 0.29
PTPA-208ENST00000411917 APCP25054 2843 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 SPG11Q96JI7 2443 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 TRBV6-6A0A0A6YYG2 114 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 K7N7A8 449 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 AMY2BP19961 511 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 ERP29P30040 261 aaKnown RBP16.88■□□□□ 0.29
PTPA-208ENST00000411917 CBX5P45973 191 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 GPR6P46095 362 aaPredicted RBP16.88■□□□□ 0.29
PTPA-208ENST00000411917 IL13RA1P78552 427 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 IL18Q14116 193 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 ZNF79Q15937 498 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 FAM201AQ5SY85 155 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 SFRP4Q6FHJ7 346 aaPredicted RBP16.88■□□□□ 0.29
PTPA-208ENST00000411917 C17orf107Q6ZR85 190 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 BATF2Q8N1L9 274 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 SUMF2Q8NBJ7 301 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 SEH1LQ96EE3 360 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 LURAP1Q96LR2 239 aa16.88■□□□□ 0.29
PTPA-208ENST00000411917 GAFA1Q96PS6 74 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms