RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NPFFO15130 113 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SYT7O43581 403 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 XPOTO43592 962 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 IDH1O75874 414 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 INMTO95050 263 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CRYBA1P05813 215 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 BPGMP07738 259 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 UCHL1P09936 223 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GKN3PP0CG01 181 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 BCL2P10415 239 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC2A1P11166 492 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 BCKDHAP12694 445 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MLNP12872 115 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CHN1P15882 459 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A16P16260 332 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GCFC2P16383 781 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCL3L1P16619 93 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 EEF1GP26641 437 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 IMPA1P29218 277 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SRD5A2P31213 254 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 S100A3P33764 101 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ETFBP38117 255 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ADCYAP1R1P41586 468 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR3A1P47881 315 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PCP4P48539 62 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 HSPA7P48741 367 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 RGS6P49758 472 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PPP5CP53041 499 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 RCAN1P53805 252 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CLNS1AP54105 237 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CDH6P55285 790 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 EIF3EP60228 445 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAB2AP61019 212 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC35A1P78382 337 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OGDHQ02218 1023 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CACNG1Q06432 222 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 AIMP2Q13155 320 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC13A2Q13183 592 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLAMF1Q13291 335 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAB32Q13637 225 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 THOC5Q13769 683 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 POSTNQ15063 836 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 KISS1Q15726 138 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ACSM3Q53FZ2 586 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 C1QTNF12Q5T7M4 302 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TCEAL6Q6IPX3 200 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 FAHD2BQ6P2I3 314 aaPredicted RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 LINC00299Q6ZSB3 139 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TPRG1Q6ZUI0 275 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 HDDC2Q7Z4H3 204 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CDR2LQ86X02 465 aaPredicted RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MMD2Q8IY49 270 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ELMOD2Q8IZ81 293 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GABRG1Q8N1C3 465 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MCUQ8NE86 351 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR5D13Q8NGL4 314 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2T34Q8NGX1 318 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2T3Q8NH03 318 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR10J5Q8NHC4 309 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC26A7Q8TE54 656 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GEMIN6Q8WXD5 167 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 BAALCQ8WXS3 180 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CLEC2BQ92478 149 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCT6BQ92526 530 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSR2Q969E8 191 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 RILPL2Q969X0 211 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 EID2BQ96D98 161 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MVB12AQ96EY5 273 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 LTV1Q96GA3 475 aaPredicted RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM80Q96HE8 168 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ADTRPQ96IZ2 230 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 THUMPD2Q9BTF0 503 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 FICDQ9BVA6 458 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GGACTQ9BVM4 153 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 GABARAPL3Q9BY60 117 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PRRG3Q9BZD7 231 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR8D2Q9GZM6 311 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 C20orf85Q9H1P6 137 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TTYH1Q9H313 450 aaPredicted RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SMDT1Q9H4I9 107 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 EIF2B3Q9NR50 452 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC17A5Q9NRA2 495 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 ORMDL1Q9P0S3 153 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PGAP2Q9UHJ9 254 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SNX7Q9UNH6 387 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAF3IP3Q9Y228 551 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 LYVE1Q9Y5Y7 322 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 V9GY05 133 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 V9GYY5 206 aaPredicted RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PATJQ8NI35 1801 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CARMIL1Q5VZK9 1371 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PIK3C2BO00750 1634 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PHLPP2Q6ZVD8 1323 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 XIRP2A4UGR9 3374 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ERCC6L2Q5T890 1561 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPR75-ASB3A0A0A6YYF3 556 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRBV7-9A0A0J9YWB2 115 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRBV10-3A0A0K0K1G6 114 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 METTL21EPA6NDL7 271 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CASTOR2A6NHX0 329 aa-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms