RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 KANTRA0A1W2PQU2 76 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 NMBP08949 121 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 ZNF728P0DKX0 622 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 IL24Q13007 206 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 ZNF169Q14929 603 aaPredicted RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 VWA1Q6PCB0 445 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 INO80CQ6PI98 192 aaPredicted RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 TOMM40LQ969M1 308 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 C1orf123Q9NWV4 160 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 GVINP1Q7Z2Y8 2422 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 BCL2L11O43521 198 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 NAPSAO96009 420 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 COX5AP20674 150 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 RBMXP38159 391 aaKnown RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 PPP1CBP62140 327 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 UBA52P62987 128 aaKnown RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 TSC22D1Q15714 1073 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 SRSF7Q16629 238 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP39-204ENST00000409766 ACSF3Q4G176 576 aaPredicted RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 IGFL3Q6UXB1 125 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 INO80EQ8NBZ0 244 aaPredicted RBP17.2■□□□□ 0.34
USP39-204ENST00000409766 BOD1Q96IK1 185 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 C2orf50Q96LR7 162 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 OR51I2Q9H344 312 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 PLK3Q9H4B4 646 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 CDH20Q9HBT6 801 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 LHX6Q9UPM6 363 aa17.2■□□□□ 0.34
USP39-204ENST00000409766 TEX13DA0A0J9YY54 714 aaPredicted RBP17.19■□□□□ 0.34
USP39-204ENST00000409766 AHRRA9YTQ3 701 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 H0YIZ8 118 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 RLN2P04090 185 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 HOXB1P14653 301 aaPredicted RBP17.19■□□□□ 0.34
USP39-204ENST00000409766 PIGPP57054 158 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 IL15RAQ13261 267 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 BEX5Q5H9J7 111 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 ST8SIA2Q92186 375 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 MOB3AQ96BX8 217 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 PIK3IP1Q96FE7 263 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 PKIBQ9C010 78 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 OR2J1Q9GZK6 312 aa17.19■□□□□ 0.34
USP39-204ENST00000409766 HOXB5P09067 269 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 PRKACAP17612 351 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 SPINK2P20155 84 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 FOXF2Q12947 444 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 OR2A2Q6IF42 318 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 LINC00596Q86U02 117 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 POC1AQ8NBT0 407 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 CCDC120Q96HB5 630 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 ZNF488Q96MN9 340 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 DKK4Q9UBT3 224 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 AKAP13Q12802 2813 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 KCNAB3O43448 404 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 DUSP1P28562 367 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 UCP3P55916 312 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 FXYD4P59646 89 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 RBM39Q14498 530 aaKnown RBP17.18■□□□□ 0.34
USP39-204ENST00000409766 Q9N2K0 584 aa17.18■□□□□ 0.34
USP39-204ENST00000409766 BOD1L1Q8NFC6 3051 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 LYL1P12980 280 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 GLP1RP43220 463 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 UCP2P55851 309 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 P2RX3P56373 397 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 ERVS71-1P61550 626 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 IGSF11Q5DX21 431 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 RGS7BPQ6MZT1 257 aaPredicted RBP17.17■□□□□ 0.34
USP39-204ENST00000409766 WDR31Q8NA23 367 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 C1orf162Q8NEQ5 155 aaPredicted RBP17.17■□□□□ 0.34
USP39-204ENST00000409766 DCUN1D4Q92564 292 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 MARVELD3Q96A59 401 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 PLSCR4Q9NRQ2 329 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 LAMA5O15230 3695 aa17.17■□□□□ 0.34
USP39-204ENST00000409766 IGKV3-15P01624 115 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 CBR1P16152 277 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 IGFBP7Q16270 282 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 ABCA11PQ4W5N1 156 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 FAM76BQ5HYJ3 339 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 TOR2AQ5JU69 321 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 RTN4IP1Q8WWV3 396 aaPredicted RBP17.16■□□□□ 0.34
USP39-204ENST00000409766 GALNT14Q96FL9 552 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 NAA60Q9H7X0 242 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 SPACA1Q9HBV2 294 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 POM121CA8CG34 1229 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 J3QT63 122 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 RHBDL1O75783 438 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 RAC2P15153 192 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 AADACP22760 399 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 LUMP51884 338 aaPredicted RBP17.16■□□□□ 0.34
USP39-204ENST00000409766 IL13RA2Q14627 380 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 PRSS54Q6PEW0 395 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 WDR86Q86TI4 376 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 SLC38A6Q8IZM9 456 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 FAM58AQ8N1B3 248 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 SLC25A40Q8TBP6 338 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 RRNAD1Q96FB5 475 aaKnown RBP17.16■□□□□ 0.34
USP39-204ENST00000409766 RTL8AQ9BWD3 113 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 SLC2A9Q9NRM0 540 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 MED9Q9NWA0 146 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 KCNIP3Q9Y2W7 256 aa17.16■□□□□ 0.34
USP39-204ENST00000409766 DSPP15924 2871 aaKnown RBP17.16■□□□□ 0.34
USP39-204ENST00000409766 GTF3C1Q12789 2109 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms