RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 C13orf42A0A1B0GVH6 325 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 NGFP01138 241 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 CD79AP11912 226 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 RPS2P15880 293 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 FPR2P25090 351 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 NPBWR2P48146 333 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 C11orf87Q6NUJ2 197 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 CCDC54Q8NEL0 328 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 OR10AD1Q8NGE0 317 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 APH1AQ96BI3 265 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 OPA3Q9H6K4 179 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 TNFSF18Q9UNG2 199 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 AKAP13Q12802 2813 aa13.1□□□□□ -0.31
SCAMP4-202ENST00000409472 NKX2-8O15522 239 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 HLA-GP17693 338 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ADCYAP1P18509 176 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 WT1P19544 449 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 PAX6P26367 422 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 CHATP28329 748 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 CHRFAM7AQ494W8 412 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 HIKESHIQ53FT3 197 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 TMEM128Q5BJH2 165 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 LPCAT3Q6P1A2 487 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 COLCA1Q6ZS62 124 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 LHFPL2Q6ZUX7 228 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF100Q8IYN0 542 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ZFP62Q8NB50 900 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 SPSB4Q96A44 273 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 FER1L6-AS2Q96M78 137 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ADAT1Q9BUB4 502 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 PRDM14Q9GZV8 571 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 OR51B6Q9H340 312 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 KLF13Q9Y2Y9 288 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 TNRC6AQ8NDV7 1962 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 TAS2R46P59540 309 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 CUL9Q8IWT3 2517 aa13.09□□□□□ -0.31
SCAMP4-202ENST00000409472 C5orf51A6NDU8 294 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 F8VVB4 439 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 F8VWA3 439 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 RPL36A-HNRNPH2H7BZ11 118 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 LILRA1O75019 489 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 KNG1P01042 644 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 PTGER4P35408 488 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 ASCL4Q6XD76 172 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 SSX9Q7RTT3 188 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 C5orf24Q7Z6I8 188 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF611Q8N823 705 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 HPSE2Q8WWQ2 592 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 RGCCQ9H4X1 137 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 IL36RNQ9UBH0 155 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 MGAQ8IWI9 3026 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 TXNL1O43396 289 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 XRCC2O43543 280 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 SFT2D2O95562 160 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 RNF224P0DH78 156 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 ARG2P78540 354 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 FABP9Q0Z7S8 132 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC25A26Q70HW3 274 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 PIP4P1Q86T03 277 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 OR51F2Q8NH61 342 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 SEC11CQ9BY50 192 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.32
SCAMP4-202ENST00000409472 IL18BPO95998 194 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 FCGR3AP08637 254 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 TAS2R31P59538 309 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF766Q5HY98 468 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 OSR2Q8N2R0 312 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF561Q8N587 486 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 C15orf54Q8N8G6 183 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 VRK1Q99986 396 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF552Q9H707 407 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 PARPBPQ9NWS1 579 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF724A8MTY0 619 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 H0YIZ8 118 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 KLRC4-KLRK1H3BQV0 150 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 GPR37O15354 613 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 CRHP06850 196 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 SFTPCP11686 197 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 FUT6P51993 359 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 RAB2AP61019 212 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 RAB1AP62820 205 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms