RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
GPNMB-203ENST00000409458 DTYMKP23919 212 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 PMELP40967 661 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 ZNF81P51508 661 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 MRPS15P82914 257 aaKnown RBP11.88□□□□□ -0.51
GPNMB-203ENST00000409458 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 Q6P435 159 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 SUMF2Q8NBJ7 301 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 GIMAP1Q8WWP7 306 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 BEX2Q9BXY8 128 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 WDR13Q9H1Z4 485 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 IFT22Q9H7X7 185 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 BEX1Q9HBH7 125 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
GPNMB-203ENST00000409458 SLC2A8Q9NY64 477 aa11.88□□□□□ -0.51
GPNMB-203ENST00000409458 TRAV24A0A0B4J272 114 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 hCG_1807616A0A1W2PRN6 198 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 TUBAL3A6NHL2 446 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 E7EQL1 145 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ZG16O60844 167 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 PEX14O75381 377 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 DHFRP00374 187 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 CD3EP07766 207 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 RAG2P55895 527 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 SCGB2B2Q4G0G5 96 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 VAX1Q5SQQ9 334 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 OR5H2Q8NGV7 314 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 PLCE1Q9P212 2302 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
GPNMB-203ENST00000409458 IGSF10Q6WRI0 2623 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 A0A0A6YYJ9 748 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 C7orf66A4D0T2 115 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 PYCARD-AS1I3L0S3 204 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 HS3ST1O14792 307 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 OR2H2O95918 312 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 PLAUP00749 431 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ZNF44P15621 663 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 TAS2R46P59540 309 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ZNF146Q15072 292 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
GPNMB-203ENST00000409458 RDH5Q92781 318 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
GPNMB-203ENST00000409458 PRRT1Q99946 306 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 DPCDQ9BVM2 203 aaPredicted RBP11.87□□□□□ -0.51
GPNMB-203ENST00000409458 CHST6Q9GZX3 395 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 SCP2D1Q9UJQ7 156 aa11.87□□□□□ -0.51
GPNMB-203ENST00000409458 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 SIRPB1O00241 398 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 DEGS1O15121 323 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 EGR1P18146 543 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 ANXA7P20073 488 aaKnown RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 GLRA1P23415 457 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 CEBPDP49716 269 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 MECP2P51608 486 aaKnown RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 TNFAIP6P98066 277 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 BEX5Q5H9J7 111 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 MOGAT3Q86VF5 341 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 OR5AP2Q8NGF4 316 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 NEK7Q8TDX7 302 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 HPS1Q92902 700 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-203ENST00000409458 EDARQ9UNE0 448 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
GPNMB-203ENST00000409458 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 SLC33A1O00400 549 aaPredicted RBP11.85□□□□□ -0.51
GPNMB-203ENST00000409458 CLDN14O95500 239 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 HAND1O96004 215 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 PRB1P04280 392 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 IFNA6P05013 189 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
GPNMB-203ENST00000409458 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
GPNMB-203ENST00000409458 AKAP14Q86UN6 197 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 GHITMQ9H3K2 345 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 FN3KRPQ9HA64 309 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 ETAA1Q9NY74 926 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 ANXA10Q9UJ72 324 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 ZDHHC8Q9ULC8 765 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
GPNMB-203ENST00000409458 HMX3A6NHT5 357 aa11.84□□□□□ -0.51
GPNMB-203ENST00000409458 OR2AT4A6NND4 320 aa11.84□□□□□ -0.51
GPNMB-203ENST00000409458 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
GPNMB-203ENST00000409458 H3BUI4 141 aa11.84□□□□□ -0.51
GPNMB-203ENST00000409458 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
GPNMB-203ENST00000409458 SDCBPO00560 298 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms