RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	WDYHV1	Q96HA8	205 aa		11.18	□□□□□ -0.62
RBM4-205	ENST00000409406	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.18	□□□□□ -0.62
RBM4-205	ENST00000409406	TAF9B	Q9HBM6	251 aa		11.18	□□□□□ -0.62
RBM4-205	ENST00000409406	PLA2G2E	Q9NZK7	142 aa		11.18	□□□□□ -0.62
RBM4-205	ENST00000409406	OR52A1	Q9UKL2	312 aa		11.18	□□□□□ -0.62
RBM4-205	ENST00000409406	TRAV17	A0A0B4J275	112 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406		H7C1Q1	480 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	PMP2	P02689	132 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	SLC2A1	P11166	492 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	MRPS34	P82930	218 aa	Known RBP	11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	GTF3C1	Q12789	2109 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	LBH	Q53QV2	105 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	RPL7L1	Q6DKI1	246 aa	Known RBP	11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	HEPN1	Q6WQI6	88 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	LRRC18	Q8N456	261 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	UBAC2	Q8NBM4	344 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	ASB5	Q8WWX0	329 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	YPEL4	Q96NS1	127 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	PRO1933	Q9H354	126 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	ZMAT3	Q9HA38	289 aa	Known RBP	11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	DOK5	Q9P104	306 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	SSUH2	Q9Y2M2	353 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	TSTD3	H0UI37	97 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	TTR	P02766	147 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	ISG15	P05161	165 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	MPZ	P25189	248 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	HIST1H3A	P68431	136 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	PMPCA	Q10713	525 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	HIST2H3PS2	Q5TEC6	136 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	FAM27B	Q5VT28	67 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	FAM166A	Q6J272	317 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	HIST2H3A	Q71DI3	136 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	TUSC5	Q8IXB3	177 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	OR1J1	Q8NGS3	322 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	TSEN15	Q8WW01	171 aa	Known RBP	11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	SOX7	Q9BT81	388 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	ZDHHC8	Q9ULC8	765 aa		11.17	□□□□□ -0.62
RBM4-205	ENST00000409406	ATM	Q13315	3056 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	IGHG3	P01860	377 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	COX5B	P10606	129 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	GUCA1A	P43080	201 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	RPS10	P46783	165 aa	Known RBP	11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	ZNF84	P51523	738 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	RIPPLY2	Q5TAB7	128 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	TGIF2LX	Q8IUE1	241 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	CPT1C	Q8TCG5	803 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	BCO1	Q9HAY6	547 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	MCTS1	Q9ULC4	181 aa	Known RBP	11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	TP53TG5	Q9Y2B4	290 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	STARD10	Q9Y365	291 aa		11.16	□□□□□ -0.62
RBM4-205	ENST00000409406	TMEM235	A6NFC5	223 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	SEC14L6	B5MCN3	397 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	SYNGR4	O95473	234 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	IGHV3-9	P01782	118 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	CSTB	P04080	98 aa	Known RBP	11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	TSPO2	Q5TGU0	170 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	IGFL3	Q6UXB1	125 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	GPR137C	Q8N3F9	429 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	LYPD6B	Q8NI32	183 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	CA5BP1	Q8WTZ4	195 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	MAFIP	Q8WZ33	124 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	S100A13	Q99584	98 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	PBOV1	Q9GZY1	135 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	GPR35	Q9HC97	309 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	TMEM38B	Q9NVV0	291 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	ZNF319	Q9P2F9	582 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	LOC107986453	A0A1B0GWG9	222 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	UMAD1	C9J7I0	102 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	P2RY10	O00398	339 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	LMX1B	O60663	402 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	MRPL33	O75394	65 aa	Known RBP	11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	RAB6A	P20340	208 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	RPS23	P62266	143 aa	Known RBP	11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	RAB1A	P62820	205 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	CEACAM16	Q2WEN9	425 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	MOGAT2	Q3SYC2	334 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	TMEM268	Q5VZI3	342 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	OR2A2	Q6IF42	318 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	KLHL24	Q6TFL4	600 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	PLPP7	Q8NBV4	271 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	GJC3	Q8NFK1	279 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	SLC7A10	Q9NS82	523 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	HHLA2	Q9UM44	414 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	SLC5A6	Q9Y289	635 aa		11.15	□□□□□ -0.62
RBM4-205	ENST00000409406	PTPRQ	Q9UMZ3	2332 aa		11.15	□□□□□ -0.63
RBM4-205	ENST00000409406	MYO7B	Q6PIF6	2116 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	ZNHIT1	O43257	154 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	OR2C1	O95371	312 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	HKR1	P10072	659 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	B4GALT1	P15291	398 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	PAX1	P15863	534 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	CTSS	P25774	331 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	HSD11B1	P28845	292 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	SNCA	P37840	140 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	CD81	P60033	236 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	GUK1	Q16774	197 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	SPNS3	Q6ZMD2	512 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	ACBD4	Q8NC06	268 aa		11.14	□□□□□ -0.63
RBM4-205	ENST00000409406	OR51F2	Q8NH61	342 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms