RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 TRBV23-1A0A0A0MS06 115 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 TMEM82A0PJX8 343 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 HTR3BO95264 441 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 OR2H2O95918 312 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 CSTBP04080 98 aaKnown RBP16.76■□□□□ 0.27
PTCD3-202ENST00000409326 FAM157CP0CG43 387 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 SRP14P37108 136 aaKnown RBP16.76■□□□□ 0.27
PTCD3-202ENST00000409326 IL13RA2Q14627 380 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 AWAT2Q6E213 333 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 GLIPR1L1Q6UWM5 242 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 C17orf107Q6ZR85 190 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 OR8H2Q8N162 312 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 TBC1D15Q8TC07 691 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 VCX3AQ9NNX9 186 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 PCDHB16Q9NRJ7 776 aa16.76■□□□□ 0.27
PTCD3-202ENST00000409326 PSPNO60542 156 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 FSHBP01225 129 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 CD37P11049 281 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 SERPINA2P20848 420 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 LMO1P25800 156 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 GPR176Q14439 515 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 SLC22A6Q4U2R8 563 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 NHLRC3Q5JS37 347 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 Q6P435 159 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 OSR2Q8N2R0 312 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 CHST4Q8NCG5 386 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 OR5D13Q8NGL4 314 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 UPRTQ96BW1 309 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 C1orf147Q96MC9 270 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-202ENST00000409326 NR1H4Q96RI1 486 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-202ENST00000409326 STUB1Q9UNE7 303 aa16.75■□□□□ 0.27
PTCD3-202ENST00000409326 TRIM64CA6NLI5 447 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 SIRPB1O00241 398 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 ZNF44P15621 663 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 GABRR1P24046 479 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 RIPPLY3P57055 190 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 PIGYQ3MUY2 71 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 C1orf100Q5SVJ3 147 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 KIR3DL3Q8N743 410 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 PPP1R35Q8TAP8 253 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 NANPQ8TBE9 248 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 GFI1Q99684 422 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 GHRLQ9UBU3 117 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 KPTNQ9Y664 436 aa16.74■□□□□ 0.27
PTCD3-202ENST00000409326 A0A1W2PP11 408 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 A0A1W2PQ09 198 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 GTF2F2P13984 249 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 MMP9P14780 707 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-202ENST00000409326 RBM11P57052 281 aaKnown RBP16.73■□□□□ 0.27
PTCD3-202ENST00000409326 RPL31P62899 125 aaKnown RBP16.73■□□□□ 0.27
PTCD3-202ENST00000409326 GRK1Q15835 563 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 METTL11BQ5VVY1 283 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 GDPD3Q7L5L3 318 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 LINC00596Q86U02 117 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 WDFY2Q96P53 400 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 CHST6Q9GZX3 395 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 SIRPDQ9H106 197 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 C19orf12Q9NSK7 152 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 ONECUT1Q9UBC0 465 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 ST3GAL6Q9Y274 331 aa16.73■□□□□ 0.27
PTCD3-202ENST00000409326 AK6Q9Y3D8 172 aaKnown RBP16.73■□□□□ 0.27
PTCD3-202ENST00000409326 TRAV1-2A0A0B4J238 106 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 A0A0G2JK05 382 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 SLC33A1O00400 549 aaPredicted RBP16.72■□□□□ 0.27
PTCD3-202ENST00000409326 MGST3O14880 152 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 DEGS1O15121 323 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 SLC22A1O15245 554 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 TOX4O94842 621 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 UBBP0CG47 229 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 MYL9P24844 172 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 OR3A1P47881 315 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 ARF6P62330 175 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 SCN1BQ07699 218 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 C22orf42Q6IC83 251 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 FAM185AQ8N0U4 392 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 OR4S1Q8NGB4 309 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 OR4M1Q8NGD0 313 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 OR6M1Q8NGM8 313 aa16.72■□□□□ 0.27
PTCD3-202ENST00000409326 MRPS24Q96EL2 167 aaKnown RBP16.72■□□□□ 0.27
PTCD3-202ENST00000409326 TXNL4BQ9NX01 149 aaKnown RBP16.72■□□□□ 0.27
PTCD3-202ENST00000409326 SHISA3A0PJX4 238 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 CSN2P05814 226 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 CD36P16671 472 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 JUNBP17275 347 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-202ENST00000409326 HTR2CP28335 458 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 EDDM3BP56851 147 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 PDCD1Q15116 288 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 KIAA2026Q5HYC2 2103 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 KLF17Q5JT82 389 aaPredicted RBP16.71■□□□□ 0.27
PTCD3-202ENST00000409326 CMTM4Q8IZR5 234 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 TBX15Q96SF7 602 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 PCGF1Q9BSM1 259 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 IFT22Q9H7X7 185 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 SSR3Q9UNL2 185 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 JMJD1CQ15652 2540 aa16.71■□□□□ 0.27
PTCD3-202ENST00000409326 M0R1W7 72 aa16.7■□□□□ 0.26
PTCD3-202ENST00000409326 SLC17A2O00624 439 aa16.7■□□□□ 0.26
PTCD3-202ENST00000409326 PDCD5O14737 125 aa16.7■□□□□ 0.26
PTCD3-202ENST00000409326 GEMIN2O14893 280 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms