RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TMEM246Q9BRR3 403 aa10.89□□□□□ -0.67
LIMS2-203ENST00000409254 SELENOIQ9C0D9 397 aa10.89□□□□□ -0.67
LIMS2-203ENST00000409254 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
LIMS2-203ENST00000409254 LPAR5Q9H1C0 372 aa10.89□□□□□ -0.67
LIMS2-203ENST00000409254 TMEM165Q9HC07 324 aa10.89□□□□□ -0.67
LIMS2-203ENST00000409254 SMIM30A4D0T7 59 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 RFPL4AA6NLU0 287 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 A8MXK9 166 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 RFPL4AL1F8VTS6 287 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 F8VVB4 439 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 F8VWA3 439 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 LYNX1G3V0Z9 82 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 WNT9BO14905 357 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 PDCD6O75340 191 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 LYNX1P0DP58 116 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 SNRPBP14678 240 aaKnown RBP10.88□□□□□ -0.67
LIMS2-203ENST00000409254 FUT3P21217 361 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 PRDX2P32119 198 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 MNDAP41218 407 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 CLDN12P56749 244 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 RBM39Q14498 530 aaKnown RBP10.88□□□□□ -0.67
LIMS2-203ENST00000409254 BAIAP2L2Q6UXY1 529 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 MCFD2Q8NI22 146 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 C15orf40Q8WUR7 153 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 PHF21AQ96BD5 680 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
LIMS2-203ENST00000409254 SNX22Q96L94 193 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 ZNF488Q96MN9 340 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 PATZ1Q9HBE1 687 aaKnown RBP10.88□□□□□ -0.67
LIMS2-203ENST00000409254 DCAF16Q9NXF7 216 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 PEX16Q9Y5Y5 336 aa10.88□□□□□ -0.67
LIMS2-203ENST00000409254 TLN2Q9Y4G6 2542 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 FUOMA2VDF0 154 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 CEACAM18A8MTB9 384 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 SERPINE3A8MV23 424 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 H7C1Q1 480 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 K7N7A8 449 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 ZNF737O75373 536 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 OR7C1O76099 320 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 PAHP00439 452 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 IGHV2-5P01817 119 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 CHATP28329 748 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 ERP29P30040 261 aaKnown RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 LOXL1Q08397 574 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 IKZF1Q13422 519 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 PIGYQ3MUY2 71 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 Q6P435 159 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 OR8H2Q8N162 312 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 SAMD12Q8N8I0 201 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 OR8B3Q8NGG8 313 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 OR10K1Q8NGX5 313 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 S100A16Q96FQ6 103 aaKnown RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 OR8B2Q96RD0 313 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 DCUN1D5Q9BTE7 237 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 DIABLOQ9NR28 239 aa10.87□□□□□ -0.67
LIMS2-203ENST00000409254 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-203ENST00000409254 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 A0A096LNT2 108 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 TRBV23-1A0A0A0MS06 115 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 A0A1W2PP11 408 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 ISPDA4D126 451 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 RAB27BO00194 218 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 SLC33A1O00400 549 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 MGST3O14880 152 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 GEMIN2O14893 280 aaKnown RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 TMPRSS2O15393 492 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 CLPXO76031 633 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 ECDO95905 644 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 OR2H2O95918 312 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 GSTP1P09211 210 aaKnown RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 PTBP1P26599 531 aaKnown RBP eCLIP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 TALDO1P37837 337 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 CARTPTQ16568 116 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 LRRC10Q5BKY1 277 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 GAPTQ8N292 157 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 OR10R2Q8NGX6 335 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 C1orf159Q96HA4 380 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 NEDD4LQ96PU5 975 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 NKX3-1Q99801 234 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-203ENST00000409254 BANF2Q9H503 90 aa10.86□□□□□ -0.67
LIMS2-203ENST00000409254 A0A0B4J203 849 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 PPIAL4CA0A0B4J2A2 164 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 DEGS1O15121 323 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 ADAM20O43506 726 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 XRCC3O43542 346 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 GYPAP02724 150 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 TK1P04183 234 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 WNT2P09544 360 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 ZNF44P15621 663 aa10.85□□□□□ -0.67
LIMS2-203ENST00000409254 HIST1H1DP16402 221 aaKnown RBP10.85□□□□□ -0.67
LIMS2-203ENST00000409254 USF1P22415 310 aaPredicted RBP10.85□□□□□ -0.67
LIMS2-203ENST00000409254 S100A5P33763 92 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms