RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SPRY1O43609 319 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CD1AP06126 327 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 OR5H8P0DN80 308 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 TMEM50BP56557 158 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 C1orf140Q5VVS0 124 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 THRSPQ92748 146 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 PGAM5Q96HS1 289 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 BCO1Q9HAY6 547 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 SIRT7Q9NRC8 400 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CEP192Q8TEP8 1941 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CDC14BO60729 498 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CLPSP04118 112 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 OTX2P32243 289 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 ELLP55199 621 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 FAM185AQ8N0U4 392 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 RBM14Q96PK6 669 aaKnown RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 MSL2Q9HCI7 577 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 TUBG2Q9NRH3 451 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 UBE2J1Q9Y385 318 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 LRP4O75096 1905 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CCDC187A0A096LP49 1063 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 DHRS7CA6NNS2 312 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 TTRP02766 147 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 FPR2P25090 351 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 GUCA1AP43080 201 aaPredicted RBP11.33□□□□□ -0.6
PTPRN-202ENST00000409251 ZXDAP98168 799 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 C17orf82Q86X59 251 aaPredicted RBP11.33□□□□□ -0.6
PTPRN-202ENST00000409251 UBALD2Q8IYN6 164 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 NKAIN3Q8N8D7 197 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 NSG1A0A0A6YYJ2 146 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 CEBPZOSA8MTT3 80 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 ZNF16P17020 682 aaPredicted RBP11.33□□□□□ -0.6
PTPRN-202ENST00000409251 RNF4P78317 190 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 C11orf40Q8WZ69 217 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 CEP295Q9C0D2 2601 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 EDN3P14138 238 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 FUT3P21217 361 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 PLA2G5P39877 138 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 TIPARPQ7Z3E1 657 aaKnown RBP11.33□□□□□ -0.6
PTPRN-202ENST00000409251 OR10G3Q8NGC4 313 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
PTPRN-202ENST00000409251 TRAV36DV7A0A075B6V5 113 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 ZNF121P58317 390 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-202ENST00000409251 CLRN1P58418 232 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 ELOBQ15370 118 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 IZUMO4Q1ZYL8 232 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 DNM1P46Q6ZS02 220 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 A0A1W2PNR3 127 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 ST8SIA3O43173 380 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 LINC00114Q6XXX2 140 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-202ENST00000409251 OR1N1Q8NGS0 311 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 LY6G6EA0A0G2JKS1 128 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 DEDDO75618 318 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 SCAND1P57086 179 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 FAM166AQ6J272 317 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 LGI3Q8N145 548 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 U3KQA8 63 aa11.32□□□□□ -0.6
PTPRN-202ENST00000409251 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 E5RGE8 158 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 PAX6P26367 422 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 HERV-K104P61576 105 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
PTPRN-202ENST00000409251 ADIPOR1Q96A54 375 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 MUCL1Q96DR8 90 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 DDA1Q9BW61 102 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 DEFB126Q9BYW3 111 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 ACACAQ13085 2346 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 DANCRP0C864 163 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 ANOS1P23352 680 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 ZNF141Q15928 474 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-202ENST00000409251 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 G6PC2Q9NQR9 355 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 POLE3Q9NRF9 147 aa11.31□□□□□ -0.6
PTPRN-202ENST00000409251 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms