RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 MIOXQ9UGB7 285 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 A0A096LNT2 108 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 SIRPB1O00241 398 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 DEGS1O15121 323 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 LMO4P61968 165 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 SLC36A1Q7Z2H8 476 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 SPATA2Q9UM82 520 aa27.73■■■□□ 2.03
CSNK1E-204ENST00000403904 IGHV2-5P01817 119 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 CHRM2P08172 466 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 WNT2P09544 360 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 IL2RGP31785 369 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 SCAND1P57086 179 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 IL13RA1P78552 427 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 URM1Q9BTM9 101 aaKnown RBP27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 TM2D1Q9BX74 207 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 COMMD3Q9UBI1 195 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 ETV7Q9Y603 341 aa27.72■■■□□ 2.03
CSNK1E-204ENST00000403904 SIGLEC5O15389 551 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 RAB6AP20340 208 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 LINC00596Q86U02 117 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 ZNF561Q8N587 486 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 MAPK1IP1LQ8NDC0 245 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 AP3S1Q92572 193 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 PTX4Q96A99 478 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 SEBOXQ9HB31 216 aaPredicted RBP27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 MED13LQ71F56 2210 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 DOCK11Q5JSL3 2073 aa27.71■■■□□ 2.03
CSNK1E-204ENST00000403904 A0A0A6YYD4 124 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 CPT2P23786 658 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 SEC61A1P61619 476 aaKnown RBP27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 MPV17LQ2QL34 196 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 BIVMQ86UB2 503 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 ASCC1Q8N9N2 400 aaKnown RBP27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 ACOT12Q8WYK0 555 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 NEIL1Q96FI4 390 aaPredicted RBP27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 MED30Q96HR3 178 aa27.7■■■□□ 2.03
CSNK1E-204ENST00000403904 F5H0A9 414 aaPredicted RBP27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 NLRC3Q7RTR2 1065 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 OR8B3Q8NGG8 313 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 OR8B2Q96RD0 313 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 SLIRPQ9GZT3 109 aaKnown RBP27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 CELSR1Q9NYQ6 3014 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 PSPNO60542 156 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 FCN3O75636 299 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 VEGFCP49767 419 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 ATAD3CQ5T2N8 411 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 FGFRL1Q8N441 504 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 TMEM185AQ8NFB2 350 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 SLC25A38Q96DW6 304 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 RHBDL2Q9NX52 303 aa27.69■■■□□ 2.02
CSNK1E-204ENST00000403904 CR1P17927 2039 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 TRAV24A0A0B4J272 114 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 TMEM82A0PJX8 343 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 SLC33A1O00400 549 aaPredicted RBP27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 DVL1O14640 695 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 ZNF737O75373 536 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 LMO1P25800 156 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 LOXL1Q08397 574 aaPredicted RBP27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 SIGIRRQ6IA17 410 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 ZNF841Q6ZN19 808 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 C17orf107Q6ZR85 190 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM89BQ8N5H3 189 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 SAMD12Q8N8I0 201 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 RAB39BQ96DA2 213 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 CHST6Q9GZX3 395 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 ATG5Q9H1Y0 275 aa27.68■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A10PA6NDY2 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A18PA6NE21 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A16PA6NEW6 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A20PA6NIJ5 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A8PA6NJQ4 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A7PA6NKC0 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A22PA8MWA6 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A12PA8MX19 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A5PA8MXJ8 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A23PA8MXZ1 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 HSPB6O14558 160 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A15PP0C7V4 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A13PP0C7W8 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A14PP0C7W9 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 FAM90A24PP0C7X0 464 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 PITPNBP48739 271 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 BRICD5Q6PL45 260 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 CHST4Q8NCG5 386 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 IFT22Q9H7X7 185 aa27.67■■■□□ 2.02
CSNK1E-204ENST00000403904 SOCS1O15524 211 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 NDUFB3O43676 98 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 DYNC1I2Q13409 638 aaKnown RBP27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 CIARTQ8N365 385 aaPredicted RBP27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 POM121Q96HA1 1249 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 CYYR1Q96J86 154 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 SHARPINQ9H0F6 387 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 SLC25A10Q9UBX3 287 aaPredicted RBP27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 MALRD1Q5VYJ5 2156 aa27.66■■■□□ 2.02
CSNK1E-204ENST00000403904 METTL21EPA6NDL7 271 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 K7N7A8 449 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 TK1P04183 234 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 BLVRBP30043 206 aaPredicted RBP27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 MOGAT2Q3SYC2 334 aa27.65■■■□□ 2.02
CSNK1E-204ENST00000403904 MZT2AQ6P582 158 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms