RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 TP53TG5Q9Y2B4 290 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 ZNF92Q03936 586 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 IL13RA2Q14627 380 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 C1QL2Q7Z5L3 287 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 GCNT2Q8N0V5 402 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 RXFP4Q8TDU9 374 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 ZNHIT1O43257 154 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 CD8AP01732 235 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 FABP6P51161 128 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 EDDM3BP56851 147 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 OR2B8PP59922 312 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.17■□□□□ 0.18
USP48-204ENST00000400301 CLDN23Q96B33 292 aa16.17■□□□□ 0.18
USP48-204ENST00000400301 MYOZ1Q9NP98 299 aaPredicted RBP16.17■□□□□ 0.18
USP48-204ENST00000400301 OR2C1O95371 312 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 RCC1P18754 421 aaPredicted RBP16.16■□□□□ 0.18
USP48-204ENST00000400301 SMUG1Q53HV7 270 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 RBMS3Q6XE24 437 aaKnown RBP16.16■□□□□ 0.18
USP48-204ENST00000400301 OR1J1Q8NGS3 322 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 OR10C1Q96KK4 312 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 TCEAL7Q9BRU2 100 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 MRPL13Q9BYD1 178 aaKnown RBP16.16■□□□□ 0.18
USP48-204ENST00000400301 HEXA-AS1Q9H8Q6 139 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 MFNGO00587 321 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 SPINT2O43291 252 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 IFNA4P05014 189 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 MELTFP08582 738 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 FCGR3AP08637 254 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 OR5C1Q8NGR4 320 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 EDEM2Q9BV94 578 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 SPTBN2O15020 2390 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 TMEM265A0A087WTH1 108 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 PDLIM3Q53GG5 364 aaPredicted RBP16.16■□□□□ 0.18
USP48-204ENST00000400301 LIN7CQ9NUP9 197 aaKnown RBP16.16■□□□□ 0.18
USP48-204ENST00000400301 PI4KAP42356 2102 aa16.16■□□□□ 0.18
USP48-204ENST00000400301 MPPED1O15442 326 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 IFNA10P01566 189 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 NAAAQ02083 359 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 KLK2P20151 261 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 RAB31Q13636 194 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 NTNG2Q96CW9 530 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 BCL3P20749 454 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 SKA3Q8IX90 412 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 COMMD1Q8N668 190 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 NUDT16L1Q9BRJ7 211 aaKnown RBP16.15■□□□□ 0.18
USP48-204ENST00000400301 SRXN1Q9BYN0 137 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 PRELID3BQ9Y3B1 194 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 RPP30P78346 268 aaKnown RBP16.15■□□□□ 0.18
USP48-204ENST00000400301 TBC1D26Q86UD7 250 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 FBXO17Q96EF6 278 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 PSENENQ9NZ42 101 aa16.15■□□□□ 0.18
USP48-204ENST00000400301 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.18
USP48-204ENST00000400301 HIST2H3PS2Q5TEC6 136 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 TMEM211Q6ICI0 200 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 ADAT1Q9BUB4 502 aaKnown RBP16.14■□□□□ 0.17
USP48-204ENST00000400301 RAB9BQ9NP90 201 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 TMEM9BQ9NQ34 198 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
USP48-204ENST00000400301 SELEP16581 610 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 SLC7A10Q9NS82 523 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 DHRS7CA6NNS2 312 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 TMEM50BP56557 158 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 ZNF273Q14593 569 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 CST9LP1Q5W188 147 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 H2BFWTQ7Z2G1 175 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 GPR27Q9NS67 375 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 DNAJC13O75165 2243 aa16.14■□□□□ 0.17
USP48-204ENST00000400301 B4E171 279 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 TSPAN7P41732 249 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 CXorf67Q86X51 503 aaPredicted RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 OR2M7Q8NG81 312 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 HEYLQ9NQ87 328 aaPredicted RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 LRRK1Q38SD2 2015 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 TRAV14DV4A0A0A6YYC5 116 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 A0A0U1RQK1 487 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 F12P00748 615 aaPredicted RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 FGF2P09038 288 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 PTGER4P35408 488 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 S100A12P80511 92 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 ENDOGQ14249 297 aaKnown RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 C10orf128Q5T292 105 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 GAPTQ8N292 157 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 OR11L1Q8NGX0 322 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 EFNA2O43921 213 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 KIAA0141Q14154 515 aaPredicted RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 ZNF766Q5HY98 468 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 OR10S1Q8NGN2 331 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 ESRP2Q9H6T0 727 aaKnown RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 RBM11P57052 281 aaKnown RBP16.13■□□□□ 0.17
USP48-204ENST00000400301 OR2A2Q6IF42 318 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 MED9Q9NWA0 146 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 SH3BGRL2Q9UJC5 107 aa16.13■□□□□ 0.17
USP48-204ENST00000400301 OR5B21A6NL26 309 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 TAS2R30P59541 319 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 HIST2H3AQ71DI3 136 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 OR10AD1Q8NGE0 317 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 CACNA1DQ01668 2161 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 TNFSF4P23510 183 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms