RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ATAD5Q96QE3 1844 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PRR32B1ATL7 298 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 HIST1H3AP68431 136 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PABPC1L2AQ5JQF8 200 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 NHLRC1Q6VVB1 395 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ATRXP46100 2492 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 IGHV3-21A0A0B4J1V1 117 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 TRDV1A0A1B0GX56 115 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 LMX1BO60663 402 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 AQP8O94778 261 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 FGF2P09038 288 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 FCGR2CP31995 323 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 MTNR1BP49286 362 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SUMO3P55854 103 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PRSS45Q7RTY3 260 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 MYPOPQ86VE0 399 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC25A46Q96AG3 418 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 TP53RKQ96S44 253 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF665Q9H7R5 613 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 GMPR2Q9P2T1 348 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF735P0CB33 412 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ACP1P24666 158 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM3AP98173 230 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PDZK1IP1Q13113 114 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 OR2F1Q13607 317 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PRSS36Q5K4E3 855 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 WDR88Q6ZMY6 472 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ZC3H12DA2A288 527 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PRSS37A4D1T9 235 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SS18L1O75177 396 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 S100A8P05109 93 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 NMUP48645 174 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF787Q6DD87 383 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 CALHM3Q86XJ0 350 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 MUC20Q8N307 709 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC26A10Q8NG04 563 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 OR6C3Q9NZP0 311 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 CCL27Q9Y4X3 112 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 LDLRAD4O15165 306 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM106CPP0CH98 169 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 KIR3DL2P43630 455 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 KIR2DS2P43631 304 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 LY6DQ14210 128 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 Q6ZN92 141 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 C16orf47Q6ZP98 133 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 SMRP1Q8NCR6 262 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 NEURL3Q96EH8 262 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 TEX101Q9BY14 249 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 NKX6-2Q9C056 277 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 PIGMQ9H3S5 423 aa9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-216ENST00000399638 CD80P33681 288 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 RBMS2Q15434 407 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 GABRA6Q16445 453 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CXCL16Q9H2A7 254 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 TMEM129A0AVI4 362 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 FAM24AA6NFZ4 105 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 HSBP1O75506 76 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 SRD5A2P31213 254 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 SUCLG1P53597 346 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 BAK1Q16611 211 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 FFAR4Q5NUL3 377 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 EIF4E3Q8N5X7 224 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 PHYHIPQ92561 330 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 PLAC1Q9HBJ0 212 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 HERVK_113P61574 105 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC17A1Q14916 467 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ZBTB37Q5TC79 503 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ARIH2OSQ8N7S6 290 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 BVESQ8NE79 360 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 METTL26Q96S19 204 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 GVINP1Q7Z2Y8 2422 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CR2P20023 1033 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 GDNFP39905 211 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 DCAF10Q5QP82 559 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CABLES2Q9BTV7 478 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 PAPLNO95428 1278 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CDS2O95674 445 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 OR4E1P0C645 316 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 SHC1P29353 583 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ERVFRD-1P60508 538 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 MMDQ15546 238 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CLLU1Q5K131 121 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF774Q6NX45 483 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 NUFIP2Q7Z417 695 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 OR2Y1Q8NGV0 311 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms