RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 COX7A1P24310 79 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 LMO1P25800 156 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 DUSP1P28562 367 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 OR3A1P47881 315 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 ETV1P50549 477 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 BMXP51813 675 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 ZP1P60852 638 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 RCN1Q15293 331 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 KISS1Q15726 138 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 ZNF626Q68DY1 528 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 RNF144BQ7Z419 303 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 OR11H6Q8NGC7 330 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 OR5D18Q8NGL1 313 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 GPR148Q8TDV2 347 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 RGP1Q92546 391 aaPredicted RBP12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 SSX3Q99909 188 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 CITED1Q99966 193 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 CHST6Q9GZX3 395 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 GSTK1Q9Y2Q3 226 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 HSPE1-MOB4S4R3N1 261 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 H3BUX3 64 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 CASQ2O14958 399 aaPredicted RBP12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 CLPXO76031 633 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 OR2H2O95918 312 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 CD2P06729 351 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 MYL12AP19105 171 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 RAB3AP20336 220 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 P2RX3P56373 397 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 PROK1P58294 105 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 XAF1Q6GPH4 301 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 CHST4Q8NCG5 386 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 PXT1Q8NFP0 134 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 OR4S1Q8NGB4 309 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 FOXRED1Q96CU9 486 aaPredicted RBP12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 RAB18Q9NP72 206 aa12.07□□□□□ -0.48
SMIM11A-203ENST00000399299 FUOMA2VDF0 154 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 VGLL3A8MV65 326 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 SIRPB1O00241 398 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 OGG1O15527 345 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 CSN2P05814 226 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 CALCBP10092 127 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 MTNR1BP49286 362 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 SNU13P55769 128 aaKnown RBP12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 MED21Q13503 144 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 OGFRL1Q5TC84 451 aaPredicted RBP12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 OR2G6Q5TZ20 316 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 ELP2Q6IA86 826 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 OR52N1Q8NH53 320 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 TMEM80Q96HE8 168 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 UBE2J1Q9Y385 318 aaPredicted RBP12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
SMIM11A-203ENST00000399299 MAGEB3O15480 346 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 ARG1P05089 322 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 ZNF44P15621 663 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 CAPGP40121 348 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 SOX2P48431 317 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 ASPHD2Q6ICH7 369 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 Q6P435 159 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 OR51A2Q8NGJ7 313 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 CORO2AQ92828 525 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 TMEM106AQ96A25 262 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 MALSU1Q96EH3 234 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 CDCA4Q9BXL8 241 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 PPA2Q9H2U2 334 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 GAL3ST2Q9H3Q3 398 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 FBLN5Q9UBX5 448 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
SMIM11A-203ENST00000399299 TRGV10A0A0A0MS01 117 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 A0A0G2JK05 382 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 MEX3AA1L020 520 aaKnown RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 GABRPO00591 440 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 ALDOBP05062 364 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 SRSF4Q08170 494 aaKnown RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 MINOS1Q5TGZ0 78 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 TREML4Q6UXN2 200 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 TRAPPC6BQ86SZ2 158 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 C8orf59Q8N0T1 100 aaPredicted RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 ZNF485Q8NCK3 441 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 Q8NFD4 153 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 OR51T1Q8NGJ9 327 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 PIFOQ8TCI5 191 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 TMEM133Q9H2Q1 129 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 CHCHD3Q9NX63 227 aaKnown RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 TAS2R4Q9NYW5 299 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 CNOT2Q9NZN8 540 aaKnown RBP12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 CLEC2DQ9UHP7 191 aa12.04□□□□□ -0.48
SMIM11A-203ENST00000399299 SIRT4Q9Y6E7 314 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms