RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 VSIG10L2P0DP72 767 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 CTSSP25774 331 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CA5AP35218 305 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ETV5P41161 510 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CDX1P47902 265 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 UBE2IP63279 158 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 MOGAT2Q3SYC2 334 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OR10K2Q6IF99 312 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ISCA2Q86U28 154 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 D2HGDHQ8N465 521 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 DEFB119Q8N690 84 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PLPP7Q8NBV4 271 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CHST14Q8NCH0 376 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FOXN4Q96NZ1 517 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MACROD1Q9BQ69 325 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 C11orf54Q9H0W9 315 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 GLIPR2Q9H4G4 154 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ICAM5Q9UMF0 924 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TMEM56-RWDD3S4R434 201 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 hCG_38984A0A1B0GV85 526 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 M0R082 166 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SSSCA1O60232 199 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PTBP3O95758 552 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 MMP9P14780 707 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 GPX2P18283 190 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SOX2P48431 317 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MMP16P51512 607 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SUMO1P63165 101 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SRSF2Q01130 221 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SPEM2Q0P670 501 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MPV17LQ2QL34 196 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TMEM78Q5T7P6 136 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MRPL54Q6P161 138 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM214BQ7L5A3 538 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ZNF429Q86V71 674 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SAXO1Q8IYX7 474 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OR10D3Q8NH80 312 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CHST5Q9GZS9 411 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 AKIP1Q9NQ31 210 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TECRQ9NZ01 308 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A10Q9UBX3 287 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 TIMM8BQ9Y5J9 83 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 TET2Q6N021 2002 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 CCL22O00626 93 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ARPC5O15511 151 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CPN1P15169 458 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CSRP1P21291 193 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 CCKARP32238 428 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PRSS53Q2L4Q9 553 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 DEFB110Q30KQ9 67 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RAB6CQ53S08 254 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 C10orf128Q5T292 105 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TEPPQ6URK8 271 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NPWQ8N729 165 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PNPLA1Q8N8W4 532 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ZDHHC22Q8N966 263 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM181AQ8N9Y4 354 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM71CQ8NEG0 241 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OR10V1Q8NGI7 309 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RAB6CQ9H0N0 254 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 USP36Q9P275 1121 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ERRFI1Q9UJM3 462 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 NAV3Q8IVL0 2385 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 LRP4O75096 1905 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 IGLV3-16A0A075B6K0 115 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TRAV6A0A075B6T7 132 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 A0A087WUJ7 227 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 C9orf172C9J069 976 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SOD3P08294 240 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PTNP21246 168 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 IVDP26440 423 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PTGDSP41222 190 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 EDDM3AQ14507 147 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 LPAL2Q16609 132 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ZXDCQ2QGD7 858 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 CD300LDQ6UXZ3 194 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 LRRTM3Q86VH5 581 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NR2C2APQ86WQ0 139 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OR5B3Q8NH48 314 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RHOXF1Q8NHV9 184 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SP7Q8TDD2 431 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 SLAMF6Q96DU3 332 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RMI2Q96E14 147 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NRIP2Q9BQI9 281 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SPANXA1Q9NS26 97 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SLC6A13Q9NSD5 602 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MRPS18CQ9Y3D5 142 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 LRP12Q9Y561 859 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 A0A1B0GU03 582 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SMAD6O43541 496 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 PMP2P02689 132 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 P2RX3P56373 397 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NXPH1P58417 271 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PPP2CBP62714 309 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PMS2CLQ68D20 193 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CADM3Q8N126 398 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 RBPMSQ93062 196 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms