RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 DMRTC2Q8IXT2 367 aaPredicted RBP20.52■□□□□ 0.88
KHSRP-201ENST00000398148 MSI2Q96DH6 328 aaKnown RBP20.52■□□□□ 0.88
KHSRP-201ENST00000398148 CHST5Q9GZS9 411 aa20.52■□□□□ 0.88
KHSRP-201ENST00000398148 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 LILRA5A6NI73 299 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 K7N7A8 449 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 HSD17B6O14756 317 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 ADAM20O43506 726 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 PAX6P26367 422 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 STARD6P59095 220 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 RAET1LQ5VY80 246 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 PIGCQ92535 297 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 METTL9Q9H1A3 318 aa20.52■□□□□ 0.87
KHSRP-201ENST00000398148 CDX1P47902 265 aaPredicted RBP20.51■□□□□ 0.87
KHSRP-201ENST00000398148 RPL23AP62750 156 aaKnown RBP20.51■□□□□ 0.87
KHSRP-201ENST00000398148 KHDC3LQ587J8 217 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 LCN15Q6UWW0 184 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 Q6ZPA2 131 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 SNX22Q96L94 193 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 CRLF2Q9HC73 371 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 COL4A2P08572 1712 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 TERTO14746 1132 aaKnown RBP20.51■□□□□ 0.87
KHSRP-201ENST00000398148 MSR1P21757 451 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 CCNOP22674 350 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 GNRHRP30968 328 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 GRB2P62993 217 aaKnown RBP20.51■□□□□ 0.87
KHSRP-201ENST00000398148 ENDOGQ14249 297 aaKnown RBP20.51■□□□□ 0.87
KHSRP-201ENST00000398148 SPSB3Q6PJ21 355 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 OXGR1Q96P68 337 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 TUBA4BQ9H853 241 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 WSB1Q9Y6I7 421 aa20.51■□□□□ 0.87
KHSRP-201ENST00000398148 WRBO00258 174 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 HMGB3O15347 200 aaKnown RBP20.5■□□□□ 0.87
KHSRP-201ENST00000398148 NKX2-1P43699 371 aaPredicted RBP20.5■□□□□ 0.87
KHSRP-201ENST00000398148 RPS18P62269 152 aaKnown RBP20.5■□□□□ 0.87
KHSRP-201ENST00000398148 VAMP2P63027 116 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 LGI3Q8N145 548 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 TSTD1Q8NFU3 115 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 UBALD1Q8TB05 177 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 BORCS8Q96FH0 119 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 BOD1Q96IK1 185 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 SSX3Q99909 188 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 ZNF729A6NN14 1252 aaPredicted RBP20.5■□□□□ 0.87
KHSRP-201ENST00000398148 TUBG1P23258 451 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 NPBWR2P48146 333 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 NKX6-1P78426 367 aaPredicted RBP20.5■□□□□ 0.87
KHSRP-201ENST00000398148 ZNF695Q8IW36 515 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 GJC3Q8NFK1 279 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 OR6X1Q8NH79 312 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 OR14L1PQ8NHC6 308 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 DMRT1Q9Y5R6 373 aa20.5■□□□□ 0.87
KHSRP-201ENST00000398148 TMEM50AO95807 157 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 C9orf135Q5VTT2 229 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 FRZBQ92765 325 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 OR6C1Q96RD1 312 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 INTS12Q96CB8 462 aaKnown RBP20.49■□□□□ 0.87
KHSRP-201ENST00000398148 ALKBH3Q96Q83 286 aaPredicted RBP20.49■□□□□ 0.87
KHSRP-201ENST00000398148 NOSIPQ9Y314 301 aaKnown RBP20.49■□□□□ 0.87
KHSRP-201ENST00000398148 PROB1E7EW31 1015 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 B4GALT1P15291 398 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 TMEM267Q0VDI3 215 aaPredicted RBP20.49■□□□□ 0.87
KHSRP-201ENST00000398148 R4GN57 208 aa20.49■□□□□ 0.87
KHSRP-201ENST00000398148 NPIPA2E9PIF3 369 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 NPIPA3F8WFD2 350 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 PPP1R2P9O14990 202 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 TRGC1P0CF51 173 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 PGA5P0DJD9 388 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 NEK7Q8TDX7 302 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 ZNF501Q96CX3 271 aaPredicted RBP20.48■□□□□ 0.87
KHSRP-201ENST00000398148 POM121Q96HA1 1249 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 C18orf12Q96KH6 178 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 MRGPRX4Q96LA9 322 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 ARV1Q9H2C2 271 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 IL36RNQ9UBH0 155 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 SRP19P09132 144 aaKnown RBP20.48■□□□□ 0.87
KHSRP-201ENST00000398148 PTGDSP41222 190 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 WDR25Q64LD2 544 aaPredicted RBP20.48■□□□□ 0.87
KHSRP-201ENST00000398148 SSX9Q7RTT3 188 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 THNSL2Q86YJ6 484 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 C14orf144Q96I85 54 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 HS3ST6Q96QI5 342 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 SLC7A10Q9NS82 523 aa20.48■□□□□ 0.87
KHSRP-201ENST00000398148 C3orf85A0A1B0GTC6 90 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 A0A1W2PNV4 684 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 TLX3O43711 291 aaPredicted RBP20.47■□□□□ 0.87
KHSRP-201ENST00000398148 SCAF4O95104 1147 aaKnown RBP20.47■□□□□ 0.87
KHSRP-201ENST00000398148 CCL1P22362 96 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 CCR5P51681 352 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 ULBP2Q9BZM5 246 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 NDUFB7P17568 137 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 PLXDC1Q8IUK5 500 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 NIPSNAP3BQ9BS92 247 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 TM2D1Q9BX74 207 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 MYOTQ9UBF9 498 aa20.47■□□□□ 0.87
KHSRP-201ENST00000398148 PHOX2AO14813 284 aa20.46■□□□□ 0.87
KHSRP-201ENST00000398148 F10P00742 488 aa20.46■□□□□ 0.87
KHSRP-201ENST00000398148 ICAM4Q14773 271 aa20.46■□□□□ 0.87
KHSRP-201ENST00000398148 FAM189A2Q15884 450 aa20.46■□□□□ 0.87
KHSRP-201ENST00000398148 IGFBP7Q16270 282 aa20.46■□□□□ 0.87
KHSRP-201ENST00000398148 TBC1D26Q86UD7 250 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms