RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TMEM50BP56557 158 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 MRPS15P82914 257 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF260Q3ZCT1 412 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 CDNFQ49AH0 187 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 STUMQ69YW2 141 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 Q6P435 159 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 TGIF2LYQ8IUE0 185 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 IZUMO1Q8IYV9 350 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 ARHGAP5-AS1Q96IT6 56 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 PECRQ9BY49 303 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 GSX2Q9BZM3 304 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 AUNIPQ9H7T9 357 aa19.76■□□□□ 0.75
TSPAN4-202ENST00000397396 A0A0G2JMP0 313 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 A0A0X1KG70 313 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SULT1C2O00338 296 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 DUSP1P28562 367 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 MDH2P40926 338 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 PPP5CP53041 499 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SCN1BQ07699 218 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 PYDC2Q56P42 97 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SFRP4Q6FHJ7 346 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SIGIRRQ6IA17 410 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SNX29P2Q8IUI4 249 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF561Q8N587 486 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 OR4M2Q8NGB6 313 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 ANGPTL6Q8NI99 470 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 CCDC32Q9BV29 185 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF665Q9H7R5 613 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 SCPEP1Q9HB40 452 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 BEX4Q9NWD9 120 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 DCAF16Q9NXF7 216 aa19.75■□□□□ 0.75
TSPAN4-202ENST00000397396 HLA-DQB1P01920 261 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 MELTFP08582 738 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 DNASE1P24855 282 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 PRSS3P35030 304 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 PDLIM4P50479 330 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 GNG2P59768 71 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 PAN3Q58A45 887 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 PLAC9Q5JTB6 97 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 ATPAF1Q5TC12 328 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 SHEQ5VZ18 495 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 SUMF2Q8NBJ7 301 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 DPCDQ9BVM2 203 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 SRRQ9GZT4 340 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF222Q9UK12 451 aa19.74■□□□□ 0.75
TSPAN4-202ENST00000397396 IGKV1D-17A0A075B6S4 117 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 IGHV3OR15-7A0A075B7D8 119 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 SIRPB1O00241 398 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 SLC33A1O00400 549 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 IGHV4-39P01824 125 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 GNB3P16520 340 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 GABRA2P47869 451 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 ATP5J2P56134 94 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF79Q15937 498 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 FAM201AQ5SY85 155 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 HACD4Q5VWC8 232 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 SLC36A1Q7Z2H8 476 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 C6orf201Q7Z4U5 140 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 DTX3Q8N9I9 347 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 DEFB108BQ8NET1 73 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 NEK7Q8TDX7 302 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 ST8SIA4Q92187 359 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 SEH1LQ96EE3 360 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 SDSLQ96GA7 329 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 MED30Q96HR3 178 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 ABHD1Q96SE0 405 aa19.73■□□□□ 0.75
TSPAN4-202ENST00000397396 HRNRQ86YZ3 2850 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 TRAV24A0A0B4J272 114 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 LYNX1G3V0Z9 82 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 GABARAPH6UMI1 98 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 H7C1Q1 480 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 PPIHO43447 177 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 IGHV2-70P01814 119 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 LYNX1P0DP58 116 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 CBX5P45973 191 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 GPR6P46095 362 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 COL10A1Q03692 680 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 TMEM155Q4W5P6 130 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 DCDC5Q6ZRR9 648 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 SMIM4Q8WVI0 70 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 NINJ1Q92982 152 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 SNX22Q96L94 193 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 FAM234AQ9H0X4 552 aa19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 RIMS4Q9H426 269 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-202ENST00000397396 TMEM235A6NFC5 223 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 POM121CA8CG34 1229 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 NDUFS8O00217 210 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 GSTZ1O43708 216 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 NDUFS7O75251 213 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 LY6HO94772 140 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 CD3GP09693 182 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 DSCR9P59020 149 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 IL13RA1P78552 427 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 MADCAM1Q13477 382 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 ARFRP1Q13795 201 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 PDCD1Q15116 288 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 ZMYND11Q15326 602 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 CARTPTQ16568 116 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 ZNF788Q6ZQV5 615 aa19.71■□□□□ 0.75
TSPAN4-202ENST00000397396 Q8N402 240 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms