RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MEPCEQ7L2J0 689 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 TCF23Q7RTU1 214 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 Q8IYB0 196 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 LINC00482Q8N8I6 264 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 OR52N4Q8NGI2 321 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 OR4P4Q8NGL7 312 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF596Q8TC21 504 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 DNAJC9Q8WXX5 260 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CORO2AQ92828 525 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 ASB9Q96DX5 294 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CNN2Q99439 309 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 SLC25A33Q9BSK2 321 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 MCRIP2Q9BUT9 160 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CADM1Q9BY67 442 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 PAPOLBQ9NRJ5 636 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 H2AFY2Q9P0M6 372 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 COPS3Q9UNS2 423 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 IGKV1-27A0A075B6S5 117 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 TRGV10A0A0A0MS01 117 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 FUOMA2VDF0 154 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 AQP12BA6NM10 295 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 OOSP1A8MZH6 123 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 SYT7O43581 403 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 GATBO75879 557 aaKnown RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 HAND1O96004 215 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CYB5AP00167 134 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 IGLV1-47P01700 117 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 AMY1AP04745 511 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 AMY2AP04746 511 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CD24P25063 80 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 PRRX1P54821 245 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CDC42P60953 191 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CXCR4P61073 352 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 EFNB1P98172 346 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 EDDM3AQ14507 147 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF146Q15072 292 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 SLC25A26Q70HW3 274 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 AQP12AQ8IXF9 295 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 ADGRG5Q8IZF4 528 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 TPRX1Q8N7U7 411 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 DNAAF1Q8NEP3 725 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 OR51D1Q8NGF3 324 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 TRMT10AQ8TBZ6 339 aaKnown RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 EMG1Q92979 244 aaKnown RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 SLAMF9Q96A28 289 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 C10orf35Q96D05 121 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 NRBF2Q96F24 287 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 BORCS8Q96FH0 119 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 GAL3ST2Q9H3Q3 398 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 PLEKHA1Q9HB21 404 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 ZFP57Q9NU63 452 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 CLN6Q9NWW5 311 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 TAS2R3Q9NYW6 316 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 MRM2Q9UI43 246 aaKnown RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
CAPN3-208ENST00000397204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF670-ZNF695F2Z2N8 137 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 TOR1AO14656 332 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 SH2D1BO14796 132 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 MAGEB4O15481 346 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-208ENST00000397204 PSPNO60542 156 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 MMP23AO75900 390 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 INMTO95050 263 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 FAM106CPP0CH98 169 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 CDK2P24941 298 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 CD34P28906 385 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 MNDAP41218 407 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 THBS3P49746 956 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 RBP2P50120 134 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 ATP1B3P54709 279 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 P2RX3P56373 397 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 ZNF91Q05481 1191 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 KPNB1Q14974 876 aaKnown RBP6.95□□□□□ -1.3
CAPN3-208ENST00000397204 PTGES3Q15185 160 aaKnown RBP6.95□□□□□ -1.3
CAPN3-208ENST00000397204 KHDC1LQ5JSQ8 128 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 SPIN3Q5JUX0 258 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 NXNL2Q5VZ03 156 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 CCDC144NLQ6NUI1 221 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 C10orf99Q6UWK7 81 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 TRAPPC6BQ86SZ2 158 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 SLC35F2Q8IXU6 374 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 HS3ST5Q8IZT8 346 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 FAM58AQ8N1B3 248 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 OSR2Q8N2R0 312 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 PP6455Q8WZ26 134 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 ADI1Q9BV57 179 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 PRRG3Q9BZD7 231 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 CHST6Q9GZX3 395 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 ADGRL4Q9HBW9 690 aa6.95□□□□□ -1.3
CAPN3-208ENST00000397204 A0A087X0M5 115 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 TRBV2A0A0J9YWF9 115 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 A0A1B0GX30 115 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 PSMB11A5LHX3 300 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A18PA6NE21 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A16PA6NEW6 464 aa6.94□□□□□ -1.3
CAPN3-208ENST00000397204 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms