RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 RBM11P57052 281 aaKnown RBP11.14□□□□□ -0.63
SEC13-209ENST00000397117 GMFBP60983 142 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 CCL8P80075 99 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 TAF9Q16594 264 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 SWI5Q1ZZU3 235 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 PIGYQ3MUY2 71 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 FIP1L1Q6UN15 594 aaKnown RBP11.14□□□□□ -0.63
SEC13-209ENST00000397117 WDR82Q6UXN9 313 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 MOGAT3Q86VF5 341 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 LYSMD2Q8IV50 215 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 FAM58AQ8N1B3 248 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 FAM89BQ8N5H3 189 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 Q8NFD4 153 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 ERGIC1Q969X5 290 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 RAB3CQ96E17 227 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 ABCB10Q9NRK6 738 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 F8VVB4 439 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 F8VWA3 439 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 GEMIN2O14893 280 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 SOCS1O15524 211 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 SSX4O60224 188 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 HLA-DQB1P01920 261 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 BLVRBP30043 206 aaPredicted RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 GATA4P43694 442 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 SNU13P55769 128 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 TMEM249Q2WGJ8 235 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 TRIQKQ629K1 86 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 ZCCHC24Q8N2G6 241 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 POC1AQ8NBT0 407 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 OR11L1Q8NGX0 322 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 LRRC29Q8WV35 223 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 NRIP2Q9BQI9 281 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 ISPDA4D126 451 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 H3BUI4 141 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 CTDSPLO15194 276 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 NOS1APO75052 506 aaPredicted RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 IRF2P14316 349 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 GNB3P16520 340 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 GLRA1P23415 457 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 PRSS3P35030 304 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 INPP1P49441 399 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 SPRNQ5BIV9 151 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 RNASE12Q5GAN4 147 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 NHLRC3Q5JS37 347 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 DCDC5Q6ZRR9 648 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 Q6ZTK2 550 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 OR10Z1Q8NGY1 313 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 NEDD4LQ96PU5 975 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 VRK1Q99986 396 aaPredicted RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 ZMAT3Q9HA38 289 aaKnown RBP11.13□□□□□ -0.63
SEC13-209ENST00000397117 GCM1Q9NP62 436 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A10PA6NDY2 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A18PA6NE21 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A16PA6NEW6 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A20PA6NIJ5 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A8PA6NJQ4 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A7PA6NKC0 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 LRRC30A6NM36 301 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A22PA8MWA6 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A12PA8MX19 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A5PA8MXJ8 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A23PA8MXZ1 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 OR7C1O76099 320 aaPredicted RBP11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A15PP0C7V4 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A13PP0C7W8 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A14PP0C7W9 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 FAM90A24PP0C7X0 464 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 PPOXP50336 477 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 IKZF1Q13422 519 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 C19orf18Q8NEA5 215 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 HPS1Q92902 700 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 THAP7Q9BT49 309 aaPredicted RBP11.12□□□□□ -0.63
SEC13-209ENST00000397117 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 RNF7Q9UBF6 113 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 GLS2Q9UI32 602 aa11.12□□□□□ -0.63
SEC13-209ENST00000397117 GABARAPH6UMI1 98 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms