RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HMGN3Q15651 99 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
NUP98-204ENST00000397004 Q8WTZ3 238 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 MAGT1Q9H0U3 335 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 CCDC163A0A0D9SF12 145 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 DHHO43323 396 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 NXPH3O95157 252 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 NPBWR2P48146 333 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 RUNX1Q01196 453 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 OR1J1Q8NGS3 322 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 S100A13Q99584 98 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 CCL3P10147 92 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 EIF2S3P41091 472 aaKnown RBP12.03□□□□□ -0.48
NUP98-204ENST00000397004 EIF3IQ13347 325 aaKnown RBP12.03□□□□□ -0.48
NUP98-204ENST00000397004 PPA1Q15181 289 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 TRIM61Q5EBN2 209 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 SPNS3Q6ZMD2 512 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 CARFQ8N187 725 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 SLAMF9Q96A28 289 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 ANGPTL4Q9BY76 406 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 KCNIP3Q9Y2W7 256 aa12.03□□□□□ -0.48
NUP98-204ENST00000397004 FAM189A2Q15884 450 aa12.02□□□□□ -0.48
NUP98-204ENST00000397004 GPR157Q5UAW9 335 aa12.02□□□□□ -0.48
NUP98-204ENST00000397004 ZNF295-AS1Q8N0V1 137 aa12.02□□□□□ -0.48
NUP98-204ENST00000397004 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.48
NUP98-204ENST00000397004 LY6G6EA0A0G2JKS1 128 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 SCRG1O75711 98 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 ZFAND5O76080 213 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 RHEBQ15382 184 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 RSU1Q15404 277 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 RAB39BQ96DA2 213 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 PAPOLGQ9BWT3 736 aaKnown RBP12.02□□□□□ -0.49
NUP98-204ENST00000397004 PHF7Q9BWX1 381 aaPredicted RBP12.02□□□□□ -0.49
NUP98-204ENST00000397004 FGF23Q9GZV9 251 aaPredicted RBP12.02□□□□□ -0.49
NUP98-204ENST00000397004 KCNJ16Q9NPI9 418 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 U3KQA8 63 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 A0A0J9YW62 118 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 DTYMKP23919 212 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 ECI1P42126 302 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 ELOBQ15370 118 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 COMMD1Q8N668 190 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 NAT6Q93015 286 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
NUP98-204ENST00000397004 H3BQ15 152 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 ST8SIA3O43173 380 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 OR2C1O95371 312 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 IGFBP4P22692 258 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 DUSP1P28562 367 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 UBE2ZQ9H832 354 aaPredicted RBP12.01□□□□□ -0.49
NUP98-204ENST00000397004 CA14Q9ULX7 337 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 LIPGQ9Y5X9 500 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 CACNA1EQ15878 2313 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 IL13RA2Q14627 380 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 C9orf152Q5JTZ5 239 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 C1QL4Q86Z23 238 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 SIGLEC12Q96PQ1 595 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 IGKV1D-13A0A0B4J2D9 117 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 TNFSF11O14788 317 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
NUP98-204ENST00000397004 IGKV1-13P0DP09 117 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 HOXA5P20719 270 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 ZNF92Q03936 586 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 ICAM4Q14773 271 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 GUSBP11Q6P575 273 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 SUCNR1Q9BXA5 334 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 URGCP-MRPS24S4R325 110 aa12.01□□□□□ -0.49
NUP98-204ENST00000397004 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
NUP98-204ENST00000397004 A0A1B0GW64 132 aa12□□□□□ -0.49
NUP98-204ENST00000397004 RBFOX3A6NFN3 312 aa12□□□□□ -0.49
NUP98-204ENST00000397004 SPINK2P20155 84 aa12□□□□□ -0.49
NUP98-204ENST00000397004 HIKESHIQ53FT3 197 aa12□□□□□ -0.49
NUP98-204ENST00000397004 RABEPKQ7Z6M1 372 aa12□□□□□ -0.49
NUP98-204ENST00000397004 FSCN3Q9NQT6 498 aa12□□□□□ -0.49
NUP98-204ENST00000397004 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
NUP98-204ENST00000397004 CST7O76096 145 aa12□□□□□ -0.49
NUP98-204ENST00000397004 FAM27BQ5VT28 67 aa12□□□□□ -0.49
NUP98-204ENST00000397004 CYB561D1Q8N8Q1 229 aa12□□□□□ -0.49
NUP98-204ENST00000397004 OR5L2Q8NGL0 311 aa12□□□□□ -0.49
NUP98-204ENST00000397004 PARPBPQ9NWS1 579 aa12□□□□□ -0.49
NUP98-204ENST00000397004 DOK5Q9P104 306 aa12□□□□□ -0.49
NUP98-204ENST00000397004 FREM1Q5H8C1 2179 aa12□□□□□ -0.49
NUP98-204ENST00000397004 PPYP01298 95 aa12□□□□□ -0.49
NUP98-204ENST00000397004 S100A9P06702 114 aaKnown RBP12□□□□□ -0.49
NUP98-204ENST00000397004 SRFP11831 508 aa12□□□□□ -0.49
NUP98-204ENST00000397004 ITGA3P26006 1051 aa12□□□□□ -0.49
NUP98-204ENST00000397004 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
NUP98-204ENST00000397004 KMT5CQ86Y97 462 aa12□□□□□ -0.49
NUP98-204ENST00000397004 OR2G3Q8NGZ4 309 aa12□□□□□ -0.49
NUP98-204ENST00000397004 SLC7A10Q9NS82 523 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms