RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NPTNQ9Y639 398 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 THSD7AQ9UPZ6 1657 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 MPC2O95563 127 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 PNPP00491 289 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 AVPR2P30518 371 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 GTF2H5Q6ZYL4 71 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 RELL2Q8NC24 303 aaPredicted RBP4.84□□□□□ -1.64
VPS13C-204ENST00000395898 ZG16BQ96DA0 208 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF426Q9BUY5 554 aa4.84□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM210A6NLX4 147 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 LIMK1P53667 647 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 KRTDAPP60985 99 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PPP1R1AQ13522 171 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM183BQ1AE95 376 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ANGPTL6Q8NI99 470 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 DUSP15Q9H1R2 295 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TCAPO15273 167 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF737O75373 536 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MYF5P13349 255 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MPV17LQ2QL34 196 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 HES3Q5TGS1 186 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MBD1Q9UIS9 605 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SHISA8B8ZZ34 492 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 METAP1P53582 386 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ZIC1Q15915 447 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ST3GAL2Q16842 350 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SMRP1Q8NCR6 262 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 HSD17B10Q99714 261 aaKnown RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MS4A5Q9H3V2 200 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 LYRM2Q9NU23 88 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CACNG5Q9UF02 275 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OR5V1Q9UGF6 321 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CLDN34H7C241 214 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 G0S2P27469 103 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CDC34P49427 236 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 BHLHA15Q7RTS1 189 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 GLCCI1Q86VQ1 547 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 AMER3Q8N944 861 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ZBTB34Q8NCN2 500 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OR8B3Q8NGG8 313 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OR8B2Q96RD0 313 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TMPRSS13Q9BYE2 586 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OR1A1Q9P1Q5 309 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PSG11Q9UQ72 335 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 C11orf91Q3C1V1 193 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF260Q3ZCT1 412 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PDPNQ86YL7 162 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 DEFB124Q8NES8 71 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MOGAT1Q96PD6 335 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TET1Q8NFU7 2136 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OR2M5A3KFT3 312 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CD3EP07766 207 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PSG6Q00889 435 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 FAM74A3Q4VXF1 159 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MUC20Q8N307 709 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 EIF4E3Q8N5X7 224 aaKnown RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 DUSP18Q8NEJ0 188 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 ORAI1Q96D31 301 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 C12orf57Q99622 126 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 RHNO1Q9BSD3 238 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CES1P1Q9UKY3 287 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TEX50A0A1B0GTY4 177 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 K7ESF4 209 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CDX4O14627 284 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 MMP7P09237 267 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CTLA4P16410 223 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 OTPQ5XKR4 325 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PRSS54Q6PEW0 395 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PRSS42Q7Z5A4 293 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 NOL4LQ96MY1 436 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 RPP25Q9BUL9 199 aaKnown RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 TOLLIPQ9H0E2 274 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 CA11O75493 328 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SLC6A1P30531 599 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 COL13A1Q5TAT6 717 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 SSX7Q7RTT5 188 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 EID2BQ96D98 161 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 FAM60AQ9NP50 221 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 PCOLCE2Q9UKZ9 415 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 STARD10Q9Y365 291 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 INSIG2Q9Y5U4 225 aa4.83□□□□□ -1.64
VPS13C-204ENST00000395898 YLPM1P49750 1951 aaKnown RBP4.83□□□□□ -1.64
VPS13C-204ENST00000395898 B4DEV8 164 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FOXB2Q5VYV0 432 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CBLN3Q6UW01 205 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ATP5SQ99766 215 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 FRRS1LQ9P0K9 344 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 IGHV5-10-1A0A0J9YXX1 117 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 AKR7A2O43488 359 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 VDAC1P21796 283 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 LIAT1Q6ZQX7 453 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 ANXA10Q9UJ72 324 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 C3orf80F5H4A9 247 aa4.82□□□□□ -1.64
VPS13C-204ENST00000395898 CDC42EP2O14613 210 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms