RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF714Q96N38 554 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 MBOAT4Q96T53 435 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 HES4Q9HCC6 221 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 GMPPBQ9Y5P6 360 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 COMMD3-BMI1R4GMX3 469 aa10.64□□□□□ -0.71
VCPKMT-201ENST00000395859 TVP23AA6NH52 213 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 LINC01548A6NM66 108 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 SERPINE3A8MV23 424 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 LY6LH3BQJ8 138 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 NOS1APO75052 506 aaPredicted RBP10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 MMP23AO75900 390 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 RPL5P46777 297 aaKnown RBP10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 CDC42P60953 191 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 ISL1P61371 349 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 GNG3P63215 75 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 TSPAN31Q12999 210 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 ZDHHC23Q8IYP9 409 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 AQP11Q8NBQ7 271 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 FANK1Q8TC84 345 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 GNPDA2Q8TDQ7 276 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 C4orf3Q8WVX3 66 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF488Q96MN9 340 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 Q96MT0 163 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 OR52D1Q9H346 318 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 RGCCQ9H4X1 137 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 VCX3AQ9NNX9 186 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 TPRKBQ9Y3C4 175 aa10.63□□□□□ -0.71
VCPKMT-201ENST00000395859 SMIM31A0A1B0GVY4 71 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF732B4DXR9 585 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 ANXA2P07355 339 aaKnown RBP10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 PRKACGP22612 351 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 PYCR1P32322 319 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 CRISP1P54107 249 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF121P58317 390 aaPredicted RBP10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 GRB2P62993 217 aaKnown RBP10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 CFHR3Q02985 330 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 EIF2B1Q14232 305 aaKnown RBP10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 PNLIPRP3Q17RR3 467 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 TEX30Q5JUR7 227 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 SLC25A30Q5SVS4 291 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 HS3ST5Q8IZT8 346 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 TSPAN14Q8NG11 270 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 MYOZ3Q8TDC0 251 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 PIGCQ92535 297 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 NRIP2Q9BQI9 281 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 IFT27Q9BW83 186 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 ISYNA1Q9NPH2 558 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 CENPMQ9NSP4 180 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 PLCXD1Q9NUJ7 323 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 SCN3BQ9NY72 215 aa10.62□□□□□ -0.71
VCPKMT-201ENST00000395859 SNTNA6NMZ2 147 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 ZAR1LA6NP61 321 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 FGF16O43320 207 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 GNAO1P09471 354 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 GSSP48637 474 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 MEF2CQ06413 473 aaPredicted RBP10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 FOXE3Q13461 319 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 APOFQ13790 326 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 HAGHQ16775 308 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 CEACAM21Q3KPI0 293 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 MEDAGQ5VYS4 303 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 BAIAP2L2Q6UXY1 529 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 RASSF6Q6ZTQ3 369 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 OR11H1Q8NG94 326 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 RIBC2Q9H4K1 309 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 PKD1P98161 4303 aa10.61□□□□□ -0.71
VCPKMT-201ENST00000395859 A6NHS1 94 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 LEUTXA8MZ59 168 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 GASTP01350 101 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 ELANEP08246 267 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 SNRPGP62308 76 aaKnown RBP10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 TAF13Q15543 124 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 GFOD2Q3B7J2 385 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 ZIK1Q3SY52 487 aaPredicted RBP10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 HAGHLQ6PII5 290 aaPredicted RBP10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 LYPD6Q86Y78 171 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 TIGD4Q8IY51 512 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 RPP25LQ8N5L8 163 aaKnown RBP10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 RNF133Q8WVZ7 376 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 SLC25A19Q9HC21 320 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 BAIAP2Q9UQB8 552 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 LINC00312Q9Y6C7 94 aa10.6□□□□□ -0.71
VCPKMT-201ENST00000395859 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 I3L521 148 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 LY6G6CO95867 125 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 CRHBPP24387 322 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 CNTFRP26992 372 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 CD34P28906 385 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 SLC15A1P46059 708 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 ERVK11-1P61568 191 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms