RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MPV17LQ2QL34 196 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 LRP11Q86VZ4 500 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 OR2C3Q8N628 320 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 FRZBQ92765 325 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 UBE2J1Q9Y385 318 aaPredicted RBP12.44□□□□□ -0.42
CLIP2-203ENST00000395060 MTCH2Q9Y6C9 303 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 K7N7A8 449 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 OR7C1O76099 320 aaPredicted RBP12.44□□□□□ -0.42
CLIP2-203ENST00000395060 TRGC1P0CF51 173 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 FOSL2P15408 326 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 DYNLT3P51808 116 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 HERV-K104P61576 105 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 LCN15Q6UWW0 184 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 LIAT1Q6ZQX7 453 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 ST8SIA1Q92185 356 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 SSX3Q99909 188 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 M0R135 149 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 HMGB3O15347 200 aaKnown RBP12.43□□□□□ -0.42
CLIP2-203ENST00000395060 DHRS3O75911 302 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 F10P00742 488 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 PGA5P0DJD9 388 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 GALNSP34059 522 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 VAMP2P63027 116 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
CLIP2-203ENST00000395060 OR14L1PQ8NHC6 308 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF799Q96GE5 643 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF587BE7ETH6 402 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 HSD17B6O14756 317 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 LGI3Q8N145 548 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 GLRX2Q9NS18 164 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 KIAA2026Q5HYC2 2103 aa12.43□□□□□ -0.42
CLIP2-203ENST00000395060 A0A087X0M5 115 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 A0A1B0GX30 115 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ADAM20O43506 726 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 LCATP04180 440 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 SELLP14151 372 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 CD38P28907 300 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 GNRHRP30968 328 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 FASLGP48023 281 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 SPSB3Q6PJ21 355 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 NUDT16L1Q9BRJ7 211 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 MOB1AQ9H8S9 216 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 UNKLQ9H9P5 680 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ADAMTS9Q9P2N4 1935 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 IGHV1OR15-9A0A0B4J2B8 117 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 TERTO14746 1132 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 CCR5P51681 352 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 PLPPR5Q32ZL2 321 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 SLC25A47Q6Q0C1 308 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF695Q8IW36 515 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 OR10AD1Q8NGE0 317 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 Q96M66 194 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 ST3GAL6Q9Y274 331 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 FOXI3A8MTJ6 420 aaPredicted RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 TIAF1O95411 115 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 SRP19P09132 144 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 AKR1C8PQ5T2L2 129 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 MSI2Q96DH6 328 aaKnown RBP12.42□□□□□ -0.42
CLIP2-203ENST00000395060 UFSP2Q9NUQ7 469 aa12.42□□□□□ -0.42
CLIP2-203ENST00000395060 RAB1AP62820 205 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 TMEM267Q0VDI3 215 aaPredicted RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 RSPO1Q2MKA7 263 aaPredicted RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 COL13A1Q5TAT6 717 aaPredicted RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 THNSL2Q86YJ6 484 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 CMTM1Q8IZ96 169 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 OR5T1Q8NG75 326 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 ABHD5Q8WTS1 349 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 A0A1B0GX78 115 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 CELA2AP08217 269 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 FUT3P21217 361 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 RSG1Q9BU20 258 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 AKIRIN1Q9H9L7 192 aaPredicted RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 NOSIPQ9Y314 301 aaKnown RBP12.41□□□□□ -0.42
CLIP2-203ENST00000395060 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
CLIP2-203ENST00000395060 GDF9O60383 454 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 TMEM50AO95807 157 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 IGHV3-9P01782 118 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 LSM6P62312 80 aaKnown RBP12.4□□□□□ -0.42
CLIP2-203ENST00000395060 MRPS34P82930 218 aaKnown RBP12.4□□□□□ -0.42
CLIP2-203ENST00000395060 ICAM4Q14773 271 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 COMMD1Q8N668 190 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 UBALD1Q8TB05 177 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 PIGCQ92535 297 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 ARV1Q9H2C2 271 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms