RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CEACAM3P40198 252 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 POU3F4P49335 361 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 THBS3P49746 956 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 GNGT1P63211 74 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 ZNF146Q15072 292 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 TPTE2P1Q5T6R2 138 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 RNF144BQ7Z419 303 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 AQP12AQ8IXF9 295 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 TCEANCQ8N8B7 351 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 MCRIP2Q9BUT9 160 aaKnown RBP16.76■□□□□ 0.27
TRAF4-203ENST00000394925 ADI1Q9BV57 179 aa16.76■□□□□ 0.27
TRAF4-203ENST00000394925 BUB1B-PAK6H3BSN5 160 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 M0QZK8 103 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 TOR1AO14656 332 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 CYB5AP00167 134 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 ATP1B3P54709 279 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 GYS2P54840 703 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 RPL23AP62750 156 aaKnown RBP16.75■□□□□ 0.27
TRAF4-203ENST00000394925 DCTN2Q13561 401 aaKnown RBP16.75■□□□□ 0.27
TRAF4-203ENST00000394925 RBM39Q14498 530 aaKnown RBP16.75■□□□□ 0.27
TRAF4-203ENST00000394925 KPNB1Q14974 876 aaKnown RBP16.75■□□□□ 0.27
TRAF4-203ENST00000394925 HLA-DRB5Q30154 266 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 AADACL4Q5VUY2 407 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 C18orf65Q6ZTR6 163 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 C8orf86Q6ZUL3 223 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 PRRG3Q9BZD7 231 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 PCDHGB5Q9Y5G0 923 aa16.75■□□□□ 0.27
TRAF4-203ENST00000394925 CD34P28906 385 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 MNDAP41218 407 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 OR3A4PP47883 348 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 GLIPR1P48060 266 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 RBP2P50120 134 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 CDC42P60953 191 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 AESQ08117 197 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 SPIN3Q5JUX0 258 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 NXNL2Q5VZ03 156 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 UNQ9370/PRO34162Q6UXP9 181 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 OR2W3Q7Z3T1 314 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 DNAJC9Q8WXX5 260 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 CORO2AQ92828 525 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 CREB3L1Q96BA8 519 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 EXOSC4Q9NPD3 245 aaKnown RBP16.74■□□□□ 0.27
TRAF4-203ENST00000394925 TAS2R3Q9NYW6 316 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 GSTK1Q9Y2Q3 226 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 MOB4Q9Y3A3 225 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 HSPE1-MOB4S4R3N1 261 aa16.74■□□□□ 0.27
TRAF4-203ENST00000394925 FUOMA2VDF0 154 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 NUDT19A8MXV4 375 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 LY6LH3BQJ8 138 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 SH2D1BO14796 132 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 OR2H2O95918 312 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 CALB2P22676 271 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 DAPP51397 102 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 PRRX1P54821 245 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 MTCP1P56278 107 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 CCDC144NLQ6NUI1 221 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 CCDC54Q8NEL0 328 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 TMEM163Q8TC26 289 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 NOL4LQ96MY1 436 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-203ENST00000394925 IL4I1Q96RQ9 567 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 THTPAQ9BU02 230 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 ING3Q9NXR8 418 aa16.73■□□□□ 0.27
TRAF4-203ENST00000394925 METTL15A6NJ78 407 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 FKBP6O75344 327 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 FAM106CPP0CH98 169 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 T-ENOLP0DO92 83 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 HOXB6P17509 224 aaKnown RBP16.72■□□□□ 0.27
TRAF4-203ENST00000394925 DGCR2P98153 550 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 EFNB1P98172 346 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 UTF1Q5T230 341 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 FAHD1Q6P587 224 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 RDH10Q8IZV5 341 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 DNAAF1Q8NEP3 725 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 OR4D6Q8NGJ1 314 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 PP6455Q8WZ26 134 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 TFAP2CQ92754 450 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 HMG20AQ9NP66 347 aa16.72■□□□□ 0.27
TRAF4-203ENST00000394925 IGKV1-9A0A0C4DH69 117 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 LOC107986453A0A1B0GWG9 222 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 A0A1W2PQL4 384 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-203ENST00000394925 APOL3O95236 402 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 NHLRC4P0CG21 123 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-203ENST00000394925 MYCNOSP40205 109 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 PTGFRP43088 359 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 SCN1BQ07699 218 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 PRSS35Q8N3Z0 413 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 KLHL30-AS1Q8NEE0 82 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 CHPT1Q8WUD6 406 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 RFT1Q96AA3 541 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 C10orf35Q96D05 121 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 ADAT3Q96EY9 351 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-203ENST00000394925 NRBF2Q96F24 287 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 ZMAT5Q9UDW3 170 aaKnown RBP16.71■□□□□ 0.27
TRAF4-203ENST00000394925 LINC00527Q9UJ94 153 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 U3KQK5 164 aa16.71■□□□□ 0.27
TRAF4-203ENST00000394925 STAB2Q8WWQ8 2551 aa16.71■□□□□ 0.26
TRAF4-203ENST00000394925 ODAMA1E959 279 aa16.7■□□□□ 0.26
TRAF4-203ENST00000394925 OOSP1A8MZH6 123 aa16.7■□□□□ 0.26
TRAF4-203ENST00000394925 H0YHG0 523 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms