RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 WDR13Q9H1Z4 485 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 RIMS4Q9H426 269 aaPredicted RBP6.2□□□□□ -1.42
SMAD1-202ENST00000394092 PLEKHA2Q9HB19 425 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 RHOFQ9HBH0 211 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 OR5AC2Q9NZP5 309 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 GSKIPQ9P0R6 139 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 TUBD1Q9UJT1 453 aa6.2□□□□□ -1.42
SMAD1-202ENST00000394092 ARGFXA6NJG6 315 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 CD300LBA8K4G0 201 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 ZNF732B4DXR9 585 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 H0YIZ8 118 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 K7EPK0 472 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 FGF16O43320 207 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 WIPF1O43516 503 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 PPYP01298 95 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GAPDHP04406 335 aaKnown RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GLAP06280 429 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GPM6AP51674 278 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 FXYD4P59646 89 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GNG3P63215 75 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 TGFBR3Q03167 851 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 IL13RA2Q14627 380 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 TBC1D28Q2M2D7 210 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 FAM74A1Q5RGS3 127 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 FBXW9Q5XUX1 488 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GGNBP1Q5YKI7 109 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 LIAT1Q6ZQX7 453 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 NUFIP2Q7Z417 695 aaKnown RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 P4HA3Q7Z4N8 544 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 FAM71E2Q8N5Q1 922 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 OR5T2Q8NGG2 359 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 OR1K1Q8NGR3 316 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 HPSE2Q8WWQ2 592 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GTF3AQ92664 365 aaKnown RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 EXTL1Q92935 676 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 SLAMF9Q96A28 289 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 WDYHV1Q96HA8 205 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 GMPPAQ96IJ6 420 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 PKIBQ9C010 78 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 ZDHHC11Q9H8X9 412 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 BARX1Q9HBU1 254 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 SLC2A9Q9NRM0 540 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 RCC2Q9P258 522 aaKnown RBP6.19□□□□□ -1.42
SMAD1-202ENST00000394092 COL6A3P12111 3177 aa6.19□□□□□ -1.42
SMAD1-202ENST00000394092 MPTX1A8MV57 137 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 E5RGE8 158 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 MSTNO14793 375 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 ST8SIA5O15466 376 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 DEDDO75618 318 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 JTBO76095 146 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 TK1P04183 234 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 OR5AC1P0C628 307 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 BCL3P20749 454 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 DUSP1P28562 367 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 S100GP29377 79 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 RPL12P30050 165 aaKnown RBP6.18□□□□□ -1.42
SMAD1-202ENST00000394092 NPBWR2P48146 333 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 TMEM187Q14656 261 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 IL34Q6ZMJ4 242 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 Q8IYB0 196 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 ZNF565Q8N9K5 539 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SPERTQ8NA61 448 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 NEK7Q8TDX7 302 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 MARC2Q969Z3 335 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SAT2Q96F10 170 aaPredicted RBP6.18□□□□□ -1.42
SMAD1-202ENST00000394092 RRNAD1Q96FB5 475 aaKnown RBP6.18□□□□□ -1.42
SMAD1-202ENST00000394092 PRRX2Q99811 253 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SPIN2AQ99865 258 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SPIN2BQ9BPZ2 258 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 RSRP1Q9BUV0 290 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SLC5A7Q9GZV3 580 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 DEFB127Q9H1M4 99 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 C12orf49Q9H741 205 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 ASF1BQ9NVP2 202 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 PRR13Q9NZ81 148 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 PCDHB10Q9UN67 800 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 NSG2Q9Y328 171 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 TMED3Q9Y3Q3 217 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 SPEF1Q9Y4P9 236 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 LIPGQ9Y5X9 500 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 MED12LQ86YW9 2145 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 FRYLO94915 3013 aa6.18□□□□□ -1.42
SMAD1-202ENST00000394092 ESPL1Q14674 2120 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 GPR179Q6PRD1 2367 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 DUXBA0A1W2PPF3 345 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 MSGN1A6NI15 193 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 H7C1Q1 480 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 BET1O15155 118 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 IL18BPO95998 194 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 NAPSAO96009 420 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 CCL2P13500 99 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 PRKACAP17612 351 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 MDH2P40926 338 aaKnown RBP6.17□□□□□ -1.42
SMAD1-202ENST00000394092 TNFSF10P50591 281 aa6.17□□□□□ -1.42
SMAD1-202ENST00000394092 UBE2NP61088 152 aaKnown RBP6.17□□□□□ -1.42
SMAD1-202ENST00000394092 RND3P61587 244 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms