RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 IGKV1-9A0A0C4DH69 117 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 LEUTXA8MZ59 168 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 SH2D1BO14796 132 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 OR2F2O95006 317 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 CSN2P05814 226 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 JUNBP17275 347 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 FASP25445 335 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 MTCP1P56278 107 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 TMEM95Q3KNT9 176 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 FDX2Q6P4F2 183 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 FAM220AQ7Z4H9 259 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 CENPVQ7Z7K6 275 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 TPRX1Q8N7U7 411 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 OR10H4Q8NGA5 316 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 RCC1LQ96I51 464 aaKnown RBP13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 MBOAT4Q96T53 435 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 GABARAPL3Q9BY60 117 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 IL36RNQ9UBH0 155 aa13.98□□□□□ -0.17
SNRPA1-202ENST00000394082 COL7A1Q02388 2944 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 A0A087X0M5 115 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 A0A1B0GX30 115 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 OOSP1A8MZH6 123 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 M0QZK8 103 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 MMP23AO75900 390 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 MT-ND2P03891 347 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 PF4V1P10720 104 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 ATF1P18846 271 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 BCL3P20749 454 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 ATP6V1E1P36543 226 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 CEACAM3P40198 252 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 KIR3DL2P43630 455 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 SLC35A2P78381 396 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 PDZK1IP1Q13113 114 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 TCTEX1D4Q5JR98 221 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 TRAPPC6BQ86SZ2 158 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 CAPSLQ8WWF8 208 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 ADAT3Q96EY9 351 aaPredicted RBP13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 CIB1Q99828 191 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 OSBPL10Q9BXB5 764 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 COMMD4Q9H0A8 199 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 HHLA2Q9UM44 414 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 PCDHGB5Q9Y5G0 923 aa13.97□□□□□ -0.17
SNRPA1-202ENST00000394082 KDM4BO94953 1096 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 FCGR1AP12314 374 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 IGLL1P15814 213 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 PRKACAP17612 351 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 DUSP1P28562 367 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 RASSF2P50749 326 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 ZNF85Q03923 595 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 CCDC144NLQ6NUI1 221 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 SAXO1Q8IYX7 474 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 CHST4Q8NCG5 386 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 STMN2Q93045 179 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 EME1Q96AY2 570 aa13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-202ENST00000394082 TCRBV4S1A1TA0A5B7 111 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 H3BSH0 61 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 ATP5HO75947 161 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 INMTO95050 263 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 OR2H2O95918 312 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 AMY1AP04745 511 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 AMY2AP04746 511 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 CDK2P24941 298 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 POU3F4P49335 361 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 CCR9P51686 369 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 BNIP1Q12981 228 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 RDH10Q8IZV5 341 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 MYDGFQ969H8 173 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 OPALINQ96PE5 141 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 SLC25A33Q9BSK2 321 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 GNG8Q9UK08 70 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 AP4S1Q9Y587 144 aa13.95□□□□□ -0.18
SNRPA1-202ENST00000394082 LY6LH3BQJ8 138 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 APOL3O95236 402 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 CLIC3O95833 236 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 PF4P02776 101 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 RPSAP08865 295 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 POLR2IP36954 125 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 PRRX1P54821 245 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 HLA-DRB5Q30154 266 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 ABCA11PQ4W5N1 156 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 SLC25A30Q5SVS4 291 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 PRAMEF5Q5TYX0 476 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 THNSL2Q86YJ6 484 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 FGGYQ96C11 551 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 NCOR1P1Q9H4R4 102 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 NEK6Q9HC98 313 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 PCDHB16Q9NRJ7 776 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 GSTK1Q9Y2Q3 226 aa13.94□□□□□ -0.18
SNRPA1-202ENST00000394082 IGKV1-12A0A0C4DH73 117 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 A0A1W2PRX2 142 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 ODAMA1E959 279 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 ZNF729A6NN14 1252 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms