RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TRAV40A0A0B4J280 105 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 CCRL2O00421 344 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 CDRT1O95170 752 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 HTR3BO95264 441 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 TNFAIP8O95379 198 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 OR2H2O95918 312 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 MMP9P14780 707 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 ZNF44P15621 663 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 SRMP19623 302 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 ARF6P62330 175 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 RPL31P62899 125 aaKnown RBP12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 BLMHQ13867 455 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 PDCD1Q15116 288 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 SSX1Q16384 188 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 AWAT2Q6E213 333 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 Q8NFD4 153 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 OR10K1Q8NGX5 313 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 MUL1Q969V5 352 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 SIRPDQ9H106 197 aa12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 MRPS28Q9Y2Q9 187 aaKnown RBP12.4□□□□□ -0.42
IGHV3-53-201ENST00000390627 TMEM82A0PJX8 343 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 M0R1W7 72 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 SIRPB1O00241 398 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 SERPINA2P20848 420 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 FPR2P25090 351 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 LMO1P25800 156 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 GP2P55259 537 aaKnown RBP12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 EDDM3BP56851 147 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 FABP5Q01469 135 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 SCN1BQ07699 218 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 GRK1Q15835 563 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 NHLRC3Q5JS37 347 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 C17orf107Q6ZR85 190 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 LRRTM1Q86UE6 522 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 TBX15Q96SF7 602 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 CHST6Q9GZX3 395 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 PPIL3Q9H2H8 161 aaKnown RBP12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
IGHV3-53-201ENST00000390627 MGST3O14880 152 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 DEGS1O15121 323 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 PSPNO60542 156 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 GTF2F2P13984 249 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 GALP22466 123 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 BPIFB3P59826 476 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 EDDM3AQ14507 147 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 Q6P435 159 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 C1orf122Q6ZSJ8 110 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 LINC00596Q86U02 117 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 OR4M1Q8NGD0 313 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 MRPS24Q96EL2 167 aaKnown RBP12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 VCX3AQ9NNX9 186 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 GHRLQ9UBU3 117 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
IGHV3-53-201ENST00000390627 A0A087WXM4 84 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 TRDV1A0A1B0GX56 115 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 A0A1W2PR64 198 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 FUOMA2VDF0 154 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 CSN2P05814 226 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 UBBP0CG47 229 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 OR3A1P47881 315 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 RBM11P57052 281 aaKnown RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 MPV17LQ2QL34 196 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 KRTAP21-3Q3LHN1 58 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 PIGYQ3MUY2 71 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 TMEM200BQ69YZ2 307 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 CD200R1LQ6Q8B3 271 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 OR4S1Q8NGB4 309 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 MS4A7Q9GZW8 240 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 PPA2Q9H2U2 334 aa12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 METTL8Q9H825 291 aaKnown RBP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 NIPBLQ6KC79 2804 aaeCLIP12.37□□□□□ -0.43
IGHV3-53-201ENST00000390627 IGHV3OR16-10A0A075B7F0 116 aa12.36□□□□□ -0.43
IGHV3-53-201ENST00000390627 A0A0G2JK05 382 aa12.36□□□□□ -0.43
IGHV3-53-201ENST00000390627 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
IGHV3-53-201ENST00000390627 TCF21O43680 179 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms