RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 IFNA14P01570 189 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 TSPOP30536 169 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 TIMP3P35625 211 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 GGT2P36268 569 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 ACVRL1P37023 503 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 CDKN2AP42771 156 aaKnown RBP4.94□□□□□ -1.62
TRAV35-201ENST00000390462 TTPAP49638 278 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 RPS23P62266 143 aaKnown RBP4.94□□□□□ -1.62
TRAV35-201ENST00000390462 ARG2P78540 354 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 PRR3P79522 188 aaKnown RBP4.94□□□□□ -1.62
TRAV35-201ENST00000390462 CLEC12BQ2HXU8 276 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 CEACAM16Q2WEN9 425 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 CDNFQ49AH0 187 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 TEX43Q6ZNM6 134 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 FAM220AQ7Z4H9 259 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 STK40Q8N2I9 435 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 FAM71E2Q8N5Q1 922 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 GPR32P1Q8NGA4 272 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 OR6T1Q8NGN1 323 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 LMO3Q8TAP4 145 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 NPRL2Q8WTW4 380 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 BLNKQ8WV28 456 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 RNF185Q96GF1 192 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 SNF8Q96H20 258 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 FCRL1Q96LA6 429 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 PLEKHF1Q96S99 279 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 GABARAPL3Q9BY60 117 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 DIABLOQ9NR28 239 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 TP53TG5Q9Y2B4 290 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 MYO15AQ9UKN7 3530 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 PLXNA3P51805 1871 aa4.94□□□□□ -1.62
TRAV35-201ENST00000390462 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 GNG14A0A1W2PPG7 69 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TCAPO15273 167 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 STX10O60499 249 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZNF780AO75290 641 aaPredicted RBP4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZFAND5O76080 213 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 MMP7P09237 267 aaPredicted RBP4.93□□□□□ -1.62
TRAV35-201ENST00000390462 RAB3BP20337 219 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 PAX6P26367 422 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 PSMB9P28065 219 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 RPL12P30050 165 aaKnown RBP4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TCL1AP56279 114 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ERVFC1-1P60608 527 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 GNB1P62873 340 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 S100A12P80511 92 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TGIF1Q15583 401 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 PRR4Q16378 134 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZNF630Q2M218 657 aaPredicted RBP4.93□□□□□ -1.62
TRAV35-201ENST00000390462 KCTD16Q68DU8 428 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TMEM252Q8N6L7 170 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 GATD1Q8NB37 220 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 NEIL3Q8TAT5 605 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 IL22RA2Q969J5 263 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZNF597Q96LX8 424 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 OR5M11Q96RB7 305 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TEAD3Q99594 435 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TAPBPLQ9BX59 468 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 DEFB127Q9H1M4 99 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TMEM100Q9NV29 134 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 AIG1Q9NVV5 245 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZNFX1Q9P2E3 1918 aaKnown RBP4.93□□□□□ -1.62
TRAV35-201ENST00000390462 DMDP11532 3685 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 ZNF236Q9UL36 1845 aa4.93□□□□□ -1.62
TRAV35-201ENST00000390462 TRIOO75962 3097 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 A8MXK9 166 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 RP2O75695 350 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 IGKV5-2P06315 115 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 MRPL3P09001 348 aaKnown RBP4.92□□□□□ -1.62
TRAV35-201ENST00000390462 GNAO1P09471 354 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 CBR1P16152 277 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 WARSP23381 471 aaKnown RBP4.92□□□□□ -1.62
TRAV35-201ENST00000390462 PYCR1P32322 319 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 CEACAM6P40199 344 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 FGF8P55075 233 aaPredicted RBP4.92□□□□□ -1.62
TRAV35-201ENST00000390462 TAS2R19P59542 299 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 CD47Q08722 323 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 PTGES3Q15185 160 aaKnown RBP4.92□□□□□ -1.62
TRAV35-201ENST00000390462 TTC32Q5I0X7 151 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 FAM182AQ5T1J6 154 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 AVPI1Q5T686 147 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 METTL21CQ5VZV1 264 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 STEAP4Q687X5 459 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 FAM183BPQ6ZVS7 135 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 FAM231DQ6ZW35 169 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 LYG2Q86SG7 212 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 LGI3Q8N145 548 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 OR2D3Q8NGH3 330 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 OR4C13Q8NGP0 309 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 HAUS1Q96CS2 278 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 SMIM12Q96EX1 92 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 SLC45A3Q96JT2 553 aa4.92□□□□□ -1.62
TRAV35-201ENST00000390462 PITX2Q99697 317 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms