RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ELLP55199 621 aaPredicted RBP13.03□□□□□ -0.32
CTNS-202ENST00000381870 IQCJQ1A5X6 159 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
CTNS-202ENST00000381870 DYRK2Q92630 601 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 TP53RKQ96S44 253 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 SEMA5BQ9P283 1151 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 CCDC85CA6NKD9 419 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 SEMA4FO95754 770 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 HBE1P02100 147 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 GALNSP34059 522 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
CTNS-202ENST00000381870 BIDP55957 195 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 ZNF774Q6NX45 483 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 TM2D1Q9BX74 207 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 TBX21Q9UL17 535 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 POLR3KQ9Y2Y1 108 aaPredicted RBP13.03□□□□□ -0.32
CTNS-202ENST00000381870 MRPS18CQ9Y3D5 142 aaKnown RBP13.03□□□□□ -0.32
CTNS-202ENST00000381870 TMEM131Q92545 1883 aa13.03□□□□□ -0.32
CTNS-202ENST00000381870 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 TMEM210A6NLX4 147 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 TNFSF12O43508 249 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 PLRG1O43660 514 aaKnown RBP13.02□□□□□ -0.32
CTNS-202ENST00000381870 NXPH3O95157 252 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 SCGB1D1O95968 90 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 RPLP1P05386 114 aaKnown RBP13.02□□□□□ -0.32
CTNS-202ENST00000381870 LINC00271P0C7V0 271 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 OR3A1P47881 315 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 GNB2P62879 340 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 ARL6IP1Q15041 203 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.32
CTNS-202ENST00000381870 NECAP2Q9NVZ3 263 aa13.02□□□□□ -0.32
CTNS-202ENST00000381870 REV3LO60673 3130 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 CHD9Q3L8U1 2897 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 MYO7BQ6PIF6 2116 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 FRG2CA6NGY1 282 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 RER1O15258 196 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 TMEM50AO95807 157 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 FCGR2AP12318 317 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 PDLIM4P50479 330 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 HNRNPKP61978 463 aaKnown RBP eCLIP13.02□□□□□ -0.334e-6■■■■□ 20.3
CTNS-202ENST00000381870 MRPS11P82912 194 aaKnown RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 ZNF154Q13106 437 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 C16orf82Q7Z2V1 217 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 GRINAQ7Z429 371 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 MAML2Q8IZL2 1156 aaPredicted RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 D2HGDHQ8N465 521 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 PIGTQ969N2 578 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 ADIPOR1Q96A54 375 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 TMEM18Q96B42 140 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 TPSD1Q9BZJ3 242 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 MOB1AQ9H8S9 216 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
CTNS-202ENST00000381870 P4HTMQ9NXG6 502 aa13.02□□□□□ -0.33
CTNS-202ENST00000381870 TNRC18O15417 2968 aaPredicted RBP13.01□□□□□ -0.33
CTNS-202ENST00000381870 APODP05090 189 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 BCL2P10415 239 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 FGF8P55075 233 aaPredicted RBP13.01□□□□□ -0.33
CTNS-202ENST00000381870 DCAF7P61962 342 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 MFAP5Q13361 173 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 BRICD5Q6PL45 260 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 OOSP2Q86WS3 158 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 DTX1Q86Y01 620 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 OIT3Q8WWZ8 545 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 SLC46A1Q96NT5 459 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 CISD1Q9NZ45 108 aaKnown RBP13.01□□□□□ -0.33
CTNS-202ENST00000381870 ALG1L2C9J202 215 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 CST2P09228 141 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 OR1D4P47884 311 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 HSD17B7P56937 341 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 GAGE1Q13065 139 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 ADIRFQ15847 76 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 ARMC6Q6NXE6 501 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
CTNS-202ENST00000381870 DOK3Q7L591 496 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 C20orf196Q8IYI0 205 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 DIRC2Q96SL1 478 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 V9GYS6 101 aa13.01□□□□□ -0.33
CTNS-202ENST00000381870 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
CTNS-202ENST00000381870 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
CTNS-202ENST00000381870 C2orf72A6NCS6 295 aa13□□□□□ -0.33
CTNS-202ENST00000381870 CA11O75493 328 aa13□□□□□ -0.33
CTNS-202ENST00000381870 VAMP2P63027 116 aa13□□□□□ -0.33
CTNS-202ENST00000381870 TLE3Q04726 772 aa13□□□□□ -0.33
CTNS-202ENST00000381870 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
CTNS-202ENST00000381870 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
CTNS-202ENST00000381870 RTL6Q6ICC9 239 aa13□□□□□ -0.33
CTNS-202ENST00000381870 LCN15Q6UWW0 184 aa13□□□□□ -0.33
CTNS-202ENST00000381870 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
CTNS-202ENST00000381870 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms