RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CMBLQ96DG6 245 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 NDRG3Q9UGV2 375 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 MLXQ9UH92 298 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 RAB22AQ9UL26 194 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 ERCC1P07992 297 aaPredicted RBP10.69□□□□□ -0.7
CIITA-202ENST00000381835 WNT5AP41221 380 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 DMRTC1Q5HYR2 192 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 ZNF600Q6ZNG1 722 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 COLCA1Q6ZS62 124 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 PUSL1Q8N0Z8 303 aaKnown RBP10.69□□□□□ -0.7
CIITA-202ENST00000381835 ADAD2Q8NCV1 583 aaKnown RBP10.69□□□□□ -0.7
CIITA-202ENST00000381835 OR5AP2Q8NGF4 316 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 FAM46BQ96A09 425 aa10.69□□□□□ -0.7
CIITA-202ENST00000381835 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
CIITA-202ENST00000381835 LOC390937A0A1W2PQ73 354 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 IGKV3-15P01624 115 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 IFNA6P05013 189 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 PGAM2P15259 253 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 FAHP16930 419 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 HRH1P35367 487 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 HAAOP46952 286 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 TIMM23BQ5SRD1 257 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 LDLRAD3Q86YD5 345 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 OR5D14Q8NGL3 314 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 OR13C9Q8NGT0 318 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 DCUN1D4Q92564 292 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 CNTD2Q9H8S5 307 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 CDH20Q9HBT6 801 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 CHMP1AQ9HD42 196 aaPredicted RBP10.68□□□□□ -0.7
CIITA-202ENST00000381835 OBP2BQ9NPH6 170 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 PIGLQ9Y2B2 252 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 KCNK7Q9Y2U2 307 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 AMDHD2Q9Y303 409 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 STARD10Q9Y365 291 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 SLC25A15Q9Y619 301 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 V9GYS6 101 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 CFAP46Q8IYW2 2715 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 WIPF3A6NGB9 483 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 RAB27BO00194 218 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 XRCC2O43543 280 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
CIITA-202ENST00000381835 BTF3P20290 206 aaKnown RBP10.68□□□□□ -0.7
CIITA-202ENST00000381835 ACKR3P25106 362 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 MPZP25189 248 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 PSMB6P28072 239 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 AKR1D1P51857 326 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 IGSF11Q5DX21 431 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 FAHD2BQ6P2I3 314 aaPredicted RBP10.68□□□□□ -0.7
CIITA-202ENST00000381835 MUCL1Q96DR8 90 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 PIK3IP1Q96FE7 263 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 FAHD2AQ96GK7 314 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
CIITA-202ENST00000381835 F8W036 122 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 FGF16O43320 207 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 DUS4LO95620 317 aaKnown RBP10.67□□□□□ -0.7
CIITA-202ENST00000381835 BLOC1S1P78537 153 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 S100A12P80511 92 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 FAM3AP98173 230 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 MALLQ13021 153 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 SEMA6DQ8NFY4 1073 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 ADAT1Q9BUB4 502 aaKnown RBP10.67□□□□□ -0.7
CIITA-202ENST00000381835 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 ZNF391Q9UJN7 358 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 KLF2Q9Y5W3 355 aaPredicted RBP10.67□□□□□ -0.7
CIITA-202ENST00000381835 CECR9P0C854 216 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 GNB3P16520 340 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 PVALBP20472 110 aaPredicted RBP10.67□□□□□ -0.7
CIITA-202ENST00000381835 CCKARP32238 428 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 SERPINF1P36955 418 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
CIITA-202ENST00000381835 GSK3AP49840 483 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 PPA1Q15181 289 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 LYPD6Q86Y78 171 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 SPAG16Q8N0X2 631 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 OR1M1Q8NGA1 313 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 STOML3Q8TAV4 291 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 PRR7Q8TB68 274 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 RNF141Q8WVD5 230 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 ARL11Q969Q4 196 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
CIITA-202ENST00000381835 SPTBN1Q01082 2364 aaKnown RBP10.66□□□□□ -0.7
CIITA-202ENST00000381835 A0A0B4J2A0 478 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 hCG_38984A0A1B0GV85 526 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 C16orf97H3BN30 126 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 PMP2P02689 132 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 ZNF83P51522 516 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 UNC119Q13432 240 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 HFEQ30201 348 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 SPATA46Q5T0L3 261 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
CIITA-202ENST00000381835 CBLN2Q8IUK8 224 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 BAP18Q8IXM2 172 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 MARCH1Q8TCQ1 289 aa10.66□□□□□ -0.7
CIITA-202ENST00000381835 SPSB4Q96A44 273 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms