RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SRMP19623 302 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 DUSP1P28562 367 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 MXD1Q05195 221 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 CRIP3Q6Q6R5 217 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 FIP1L1Q6UN15 594 aaKnown RBP16.06■□□□□ 0.16
GTF3A-201ENST00000381140 FAM58AQ8N1B3 248 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 TNFAIP8L1Q8WVP5 186 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 CPNE2Q96FN4 548 aaPredicted RBP16.06■□□□□ 0.16
GTF3A-201ENST00000381140 BARHL1Q9BZE3 327 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 SLITRK2Q9H156 845 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 OPN4Q9UHM6 478 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 FOXJ3Q9UPW0 622 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 MAB21L2Q9Y586 359 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 JMJD1CQ15652 2540 aa16.06■□□□□ 0.16
GTF3A-201ENST00000381140 KIR2DS1A0A191URI9 304 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 PDCD5O14737 125 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 CLPXO76031 633 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 MAS1P04201 325 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 IGFBP3P17936 291 aaPredicted RBP16.05■□□□□ 0.16
GTF3A-201ENST00000381140 ZP1P60852 638 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 LSAMPQ13449 338 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 CROCCP3Q8IVE0 287 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 ASCC1Q8N9N2 400 aaKnown RBP16.05■□□□□ 0.16
GTF3A-201ENST00000381140 SDSLQ96GA7 329 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 TCF7L1Q9HCS4 588 aa16.05■□□□□ 0.16
GTF3A-201ENST00000381140 A0A0G2JK05 382 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 ECDO95905 644 aaPredicted RBP16.04■□□□□ 0.16
GTF3A-201ENST00000381140 RAB3BP20337 219 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 ZNF93P35789 620 aaPredicted RBP16.04■□□□□ 0.16
GTF3A-201ENST00000381140 OR3A4PP47883 348 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 FGF12P61328 243 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 COL10A1Q03692 680 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 PAX8Q06710 450 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 LINC00299Q6ZSB3 139 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 LRRTM1Q86UE6 522 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 SAXO1Q8IYX7 474 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 ZNF561Q8N587 486 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 PNLDC1Q8NA58 520 aaKnown RBP16.04■□□□□ 0.16
GTF3A-201ENST00000381140 NANPQ8TBE9 248 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 DACT3Q96B18 629 aaPredicted RBP16.04■□□□□ 0.16
GTF3A-201ENST00000381140 TSC22D3Q99576 134 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 MMP27Q9H306 513 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 RPUSD1Q9UJJ7 312 aaKnown RBP16.04■□□□□ 0.16
GTF3A-201ENST00000381140 ING4Q9UNL4 249 aa16.04■□□□□ 0.16
GTF3A-201ENST00000381140 DSCAML1Q8TD84 2053 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 A0A075B6Q4 140 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 IGHV3OR16-10A0A075B7F0 116 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 KDM4BO94953 1096 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 HAND1O96004 215 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 ALDOBP05062 364 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 SFTPBP07988 381 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 C1QL2Q7Z5L3 287 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 NR2C2APQ86WQ0 139 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 JAGN1Q8N5M9 183 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 TEX29Q8N6K0 151 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 OR10K1Q8NGX5 313 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 MCFD2Q8NI22 146 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 PCGF1Q9BSM1 259 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 HMG20AQ9NP66 347 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 ONECUT1Q9UBC0 465 aa16.03■□□□□ 0.16
GTF3A-201ENST00000381140 A0A1W2PQ09 198 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 NOTOA8MTQ0 251 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 TMEM127O75204 238 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 CHRM2P08172 466 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 CAV3P56539 151 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 ARF6P62330 175 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 SCN1BQ07699 218 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 RSU1Q15404 277 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 ZSCAN4Q8NAM6 433 aaPredicted RBP16.02■□□□□ 0.16
GTF3A-201ENST00000381140 AP3S1Q92572 193 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 DCTN5Q9BTE1 182 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 ZFHX3Q15911 3703 aa16.02■□□□□ 0.16
GTF3A-201ENST00000381140 GPR37O15354 613 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 HTR3BO95264 441 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 PPIAL4GP0DN37 164 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 PTGFRP43088 359 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 PSMD7P51665 324 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 OR10A3P58181 314 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 SFXN4Q6P4A7 337 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 PRIMA1Q86XR5 153 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 FAM185AQ8N0U4 392 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 TBC1D15Q8TC07 691 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 KCTD12Q96CX2 325 aaKnown RBP16.01■□□□□ 0.15
GTF3A-201ENST00000381140 S100A13Q99584 98 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 GFI1Q99684 422 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 GLS2Q9UI32 602 aa16.01■□□□□ 0.15
GTF3A-201ENST00000381140 SMIM30A4D0T7 59 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 MEGF11A6BM72 1044 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 SIRPB1O00241 398 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 IFNA2P01563 188 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 TK1P04183 234 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 LIPFP07098 398 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 GABRR1P24046 479 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 CFPP27918 469 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 DYNC1I2Q13409 638 aaKnown RBP16■□□□□ 0.15
GTF3A-201ENST00000381140 METTL11BQ5VVY1 283 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 PXT1Q8NFP0 134 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 OR4M1Q8NGD0 313 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 CNTD2Q9H8S5 307 aa16■□□□□ 0.15
GTF3A-201ENST00000381140 AK6Q9Y3D8 172 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms