RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 ZNF773Q6PK81 442 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 METAP1DQ6UB28 335 aaPredicted RBP12.15□□□□□ -0.46
VCX3B-201ENST00000381029 CEACAM19Q7Z692 300 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
VCX3B-201ENST00000381029 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
VCX3B-201ENST00000381029 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 GSTK1Q9Y2Q3 226 aa12.15□□□□□ -0.46
VCX3B-201ENST00000381029 DSCAML1Q8TD84 2053 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 TRAV40A0A0B4J280 105 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 A0A0G2JK05 382 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 A0A1W2PP11 408 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 M0R1W7 72 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 MAS1P04201 325 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 SRMP19623 302 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 PSMA1P25786 263 aaKnown RBP12.14□□□□□ -0.47
VCX3B-201ENST00000381029 BMXP51813 675 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
VCX3B-201ENST00000381029 RPL31P62899 125 aaKnown RBP12.14□□□□□ -0.47
VCX3B-201ENST00000381029 ZNF273Q14593 569 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 IL13RA2Q14627 380 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 TRAM1Q15629 374 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 C1orf100Q5SVJ3 147 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 HCP5Q6MZN7 132 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 USP43Q70EL4 1123 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 SVOPQ8N4V2 548 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 ASCC1Q8N9N2 400 aaKnown RBP12.14□□□□□ -0.47
VCX3B-201ENST00000381029 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
VCX3B-201ENST00000381029 GPER1Q99527 375 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
VCX3B-201ENST00000381029 IGHV3OR16-10A0A075B7F0 116 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 SHISA3A0PJX4 238 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 MEGF11A6BM72 1044 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
VCX3B-201ENST00000381029 SH2D1BO14796 132 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 RGS9O75916 674 aaPredicted RBP12.13□□□□□ -0.47
VCX3B-201ENST00000381029 IFNA2P01563 188 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 CSN2P05814 226 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 PRTN3P24158 256 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 ERP29P30040 261 aaKnown RBP12.13□□□□□ -0.47
VCX3B-201ENST00000381029 CAPZA1P52907 286 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 DLX1P56177 255 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 PAX5Q02548 391 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 PDCD1Q15116 288 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 HSD17B12Q53GQ0 312 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
VCX3B-201ENST00000381029 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 OR4M1Q8NGD0 313 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 OR5D13Q8NGL4 314 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 MUL1Q969V5 352 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 COQ2Q96H96 371 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 UQCC2Q9BRT2 126 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 PCGF1Q9BSM1 259 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 CHST6Q9GZX3 395 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
VCX3B-201ENST00000381029 EXOSC4Q9NPD3 245 aaKnown RBP12.13□□□□□ -0.47
VCX3B-201ENST00000381029 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 RNASEK-C17orf49H0YIS7 233 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 SIRPB1O00241 398 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 CCL3L1P16619 93 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
VCX3B-201ENST00000381029 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
VCX3B-201ENST00000381029 RSU1Q15404 277 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
VCX3B-201ENST00000381029 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 FCGR1BQ92637 280 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 FAM192AQ9GZU8 254 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 METTL9Q9H1A3 318 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 ESM1Q9NQ30 184 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
VCX3B-201ENST00000381029 MRPS28Q9Y2Q9 187 aaKnown RBP12.12□□□□□ -0.47
VCX3B-201ENST00000381029 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 TRDV1A0A1B0GX56 115 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 MGST3O14880 152 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 VENTXO95231 258 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 HTR3BO95264 441 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 GALP22466 123 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 GABRR1P24046 479 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 BPIFB3P59826 476 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 HILS1P60008 231 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 QRFPP83859 136 aa12.11□□□□□ -0.47
VCX3B-201ENST00000381029 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
VCX3B-201ENST00000381029 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
VCX3B-201ENST00000381029 GRK1Q15835 563 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms