RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 MARCH5Q9NX47 278 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ZAR1LA6NP61 321 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM240Q5SV17 173 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 C19orf48Q6RUI8 117 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 RIMKLAQ8IXN7 391 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ABHD3Q8WU67 409 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 C9orf172C9J069 976 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SRSF4Q08170 494 aaKnown RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 IL13RA2Q14627 380 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 AGERQ15109 404 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SHISA4Q96DD7 197 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ALKBH3Q96Q83 286 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 NDFIP1Q9BT67 221 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 HYAL3O43820 417 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SLC25A5P05141 298 aaKnown RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 CSNK1DP48730 415 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 DUSP8Q13202 625 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 WDFY1Q8IWB7 410 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 POC1AQ8NBT0 407 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SLC35A4Q96G79 324 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 MYH3P11055 1940 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 PRRT4C9JH25 899 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 OR3A4PP47883 348 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ISG20Q96AZ6 181 aaKnown RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 GMPPAQ96IJ6 420 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 C1QTNF3Q9BXJ4 246 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 KLF13Q9Y2Y9 288 aaPredicted RBP9.62□□□□□ -0.87
CLCN4-202ENST00000380833 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GFYI3L273 518 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 FPR2P25090 351 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 CAMPP49913 170 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 FOXK2Q01167 660 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 TPTE2P1Q5T6R2 138 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 ACSM6Q6P461 480 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GLRX5Q86SX6 157 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 PIK3IP1Q96FE7 263 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 FTH1P19P0C7X4 201 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 FOLR2P14207 255 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 WIPI1Q5MNZ9 446 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GDF7Q7Z4P5 450 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SLC35E3Q7Z769 313 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GABRG3Q99928 467 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 RCC2Q9P258 522 aaKnown RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 MYH13Q9UKX3 1938 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SFT2D2O95562 160 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 ADIPOQQ15848 244 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 LRP10Q7Z4F1 713 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 TGIF2LYQ8IUE0 185 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GJC3Q8NFK1 279 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SARAFQ96BY9 339 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 TM4SF18Q96CE8 201 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 HIST1H4GQ99525 98 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SRD5A3Q9H8P0 318 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 IGHV3-43A0A0B4J1X8 118 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 DSCR3O14972 297 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SLC2A10O95528 541 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SLC35E2P0CK97 266 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 IGHV3-43DP0DP04 118 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 CXCL2P19875 107 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 SCAND1P57086 179 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 RPS23P62266 143 aaKnown RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 FAM71F2Q6NXP2 309 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 MDKP21741 143 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 METAP1P53582 386 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 H1FNTQ75WM6 255 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 DLX1P56177 255 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM33P57088 247 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 IHHQ14623 411 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 OR1C1Q15619 314 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 GUSBP11Q6P575 273 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 D2HGDHQ8N465 521 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 OR2T6Q8NHC8 308 aa9.61□□□□□ -0.87
CLCN4-202ENST00000380833 EAF1Q96JC9 268 aaPredicted RBP9.61□□□□□ -0.87
CLCN4-202ENST00000380833 MED19A0JLT2 244 aaPredicted RBP9.6□□□□□ -0.87
CLCN4-202ENST00000380833 SMAD7O15105 426 aaKnown RBP9.6□□□□□ -0.87
CLCN4-202ENST00000380833 LYZL6O75951 148 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 CTXN2P0C2S0 81 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 PCMT1P22061 227 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 NAAAQ02083 359 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 GAGE2BQ13066 116 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 SLC25A35Q3KQZ1 300 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 GAGE2EQ4V326 116 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 NHLRC3Q5JS37 347 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 MRGPRDQ8TDS7 321 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 GUCD1Q96NT3 240 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 TLNRD1Q9H1K6 362 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 GAGE2DQ9UEU5 116 aa9.6□□□□□ -0.87
CLCN4-202ENST00000380833 ADAMTS5Q9UNA0 930 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms