RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 OR4M1Q8NGD0 313 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 OR52N4Q8NGI2 321 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 TNFAIP8L1Q8WVP5 186 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 CPNE2Q96FN4 548 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-202ENST00000380747 OR14A2Q96R54 314 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 TBX15Q96SF7 602 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 ZNF184Q99676 751 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-202ENST00000380747 NKX3-1Q99801 234 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-202ENST00000380747 TMED9Q9BVK6 235 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 HMG20AQ9NP66 347 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 IL36RNQ9UBH0 155 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 CKLFQ9UBR5 152 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 GLS2Q9UI32 602 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 BLOC1S6Q9UL45 172 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 GSTK1Q9Y2Q3 226 aa7.61□□□□□ -1.19
HMGN1-202ENST00000380747 LSM2Q9Y333 95 aaKnown RBP7.61□□□□□ -1.19
HMGN1-202ENST00000380747 ARHGAP32A7KAX9 2087 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 TRBV23-1A0A0A0MS06 115 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SIRPB1O00241 398 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 KDM4BO94953 1096 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 TK1P04183 234 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 MMP9P14780 707 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 GABRR1P24046 479 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 CFPP27918 469 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 TGFBR2P37173 567 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 OR3A4PP47883 348 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 EDDM3BP56851 147 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 ZP1P60852 638 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SCN1BQ07699 218 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 ACSM1Q08AH1 577 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 PDCD1Q15116 288 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 RUSC1-AS1Q66K80 236 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 CRIP3Q6Q6R5 217 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 RBMS3Q6XE24 437 aaKnown RBP7.6□□□□□ -1.19
HMGN1-202ENST00000380747 BRD3OSQ6XYD6 125 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 VMO1Q7Z5L0 202 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 PDZD9Q8IXQ8 264 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SAXO1Q8IYX7 474 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 BCL6BQ8N143 479 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-202ENST00000380747 KIR3DL3Q8N743 410 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 ZSCAN4Q8NAM6 433 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-202ENST00000380747 C8orf46Q8TAG6 207 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 ZFAND2BQ8WV99 257 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 UFD1Q92890 307 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 LHX4Q969G2 390 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 DERL3Q96Q80 235 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SUCNR1Q9BXA5 334 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 EXOSC4Q9NPD3 245 aaKnown RBP7.6□□□□□ -1.19
HMGN1-202ENST00000380747 TMEM138Q9NPI0 162 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SIRT7Q9NRC8 400 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 C19orf12Q9NSK7 152 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 ING4Q9UNL4 249 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 SOX21Q9Y651 276 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-202ENST00000380747 KPTNQ9Y664 436 aa7.6□□□□□ -1.19
HMGN1-202ENST00000380747 TRAV8-7A0A075B6U6 113 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 TRBV5-7A0A0A0MS05 114 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 TMEM82A0PJX8 343 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 MAGEA13PA6NCF6 341 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 K7N7A8 449 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 SH2D1BO14796 132 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 PIN1P1O15428 100 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 VENTXO95231 258 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 MAS1P04201 325 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 ALDOBP05062 364 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 ZNF44P15621 663 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 IGFBP3P17936 291 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 MAPK3P27361 379 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 ZNF93P35789 620 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 MTNR1BP49286 362 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 RPL31P62899 125 aaKnown RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 PRB3Q04118 309 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 BLMHQ13867 455 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 EDDM3AQ14507 147 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 INSL4Q14641 139 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 RSU1Q15404 277 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 GRK1Q15835 563 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 ACSM3Q53FZ2 586 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 SPIN3Q5JUX0 258 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 GDPD3Q7L5L3 318 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 PRSS48Q7RTY5 328 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 JAGN1Q8N5M9 183 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 MS4A15Q8N5U1 240 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 SIGLECL1Q8N7X8 197 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 PXT1Q8NFP0 134 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 THRSPQ92748 146 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 SNX22Q96L94 193 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 NR1H4Q96RI1 486 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-202ENST00000380747 S100A13Q99584 98 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 CHST6Q9GZX3 395 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 RHOFQ9HBH0 211 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 NOX4Q9NPH5 578 aa7.59□□□□□ -1.19
HMGN1-202ENST00000380747 A0A0A6YYJ9 748 aa7.58□□□□□ -1.2
HMGN1-202ENST00000380747 IGHV1-69DA0A0B4J2H0 117 aa7.58□□□□□ -1.2
HMGN1-202ENST00000380747 A0A1W2PPH5 198 aa7.58□□□□□ -1.2
HMGN1-202ENST00000380747 A0A1W2PRD5 423 aa7.58□□□□□ -1.2
HMGN1-202ENST00000380747 A0A1W2PRF3 423 aa7.58□□□□□ -1.2
HMGN1-202ENST00000380747 A0A1W2PRM7 423 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms