RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PABPC1L2AQ5JQF8 200 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 MOGAT3Q86VF5 341 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 GABRG1Q8N1C3 465 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 BPIFB2Q8N4F0 458 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PAQR4Q8N4S7 273 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 OR11H4Q8NGC9 324 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 REEP6Q96HR9 211 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM59Q9BXS4 323 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 MTFP1Q9UDX5 166 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 KLK13Q9UKR3 277 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 SAP30O75446 220 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 IGFBP3P17936 291 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 ERP29P30040 261 aaKnown RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 DDTP30046 118 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PTGER4P35408 488 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 ID1P41134 155 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 HERV-K104P63124 156 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 TAF9Q16594 264 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 ARHGAP5-AS1Q96IT6 56 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 LOXL4Q96JB6 756 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PLCE1Q9P212 2302 aa9.4□□□□□ -0.91
NEDD9-201ENST00000379433 SP1P08047 785 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ANXA3P12429 323 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 DNASE1P24855 282 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 PAX6P26367 422 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 FAUP35544 74 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 SLC10A1Q14973 349 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF766Q5HY98 468 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 KCTD9Q7L273 389 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 MRGPRDQ8TDS7 321 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 SEC22AQ96IW7 307 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 SPRY4Q9C004 299 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 CSTL1Q9H114 145 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 MCTS1Q9ULC4 181 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 MED12LQ86YW9 2145 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 C21orf140B9A014 251 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 GOSR2O14653 212 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 AKAIN1P0CW23 69 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 BLVRBP30043 206 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 GRB2P62993 217 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 NUFIP2Q7Z417 695 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF573Q86YE8 665 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 PNLDC1Q8NA58 520 aaKnown RBP9.39□□□□□ -0.91
NEDD9-201ENST00000379433 SEMA6DQ8NFY4 1073 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 MRGPRFQ96AM1 343 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 PRSS50Q9UI38 385 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ABCA4P78363 2273 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 HELTA6NFD8 242 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 TSTD3H0UI37 97 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 RAB27BO00194 218 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 ISG15P05161 165 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 DUSP1P28562 367 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 HIST3H3Q16695 136 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 C2orf68Q2NKX9 166 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 P4HA3Q7Z4N8 544 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 OR5AS1Q8N127 324 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 RAB3CQ96E17 227 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 SCMH1Q96GD3 660 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 GPR35Q9HC97 309 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
NEDD9-201ENST00000379433 FXYD6-FXYD2A0A087WZ82 144 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 WIPF3A6NGB9 483 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 APOC3P02656 99 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 PSMB6P28072 239 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 OPRM1P35372 400 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 GFRA1P56159 465 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF92Q03936 586 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 RNASE10Q5GAN6 216 aaKnown RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 GPR157Q5UAW9 335 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 PRSS57Q6UWY2 283 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 DOK3Q7L591 496 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 OR1F12Q8NHA8 337 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 FXYD6Q9H0Q3 95 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 OR10A2Q9H208 303 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 NPIPB13A6NJU9 1138 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 HSPB2A8KAH6 182 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF891A8MT65 544 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 NPIPB4C9JG80 1138 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 KLRC4-KLRK1H3BQV0 150 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 GSTZ1O43708 216 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 GZMKP49863 264 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 LHX2P50458 406 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 EIF3IQ13347 325 aaKnown RBP9.38□□□□□ -0.91
NEDD9-201ENST00000379433 HSPB2Q16082 182 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 MOB3CQ70IA8 216 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 FTMTQ8N4E7 242 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 OR11L1Q8NGX0 322 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
NEDD9-201ENST00000379433 DPCDQ9BVM2 203 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms