RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 EDARQ9UNE0 448 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 PPP1R3CQ9UQK1 317 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 ZNF736B4DX44 427 aaPredicted RBP20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 HS3ST1O14792 307 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 RFX2P48378 723 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 ACTBL2Q562R1 376 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 Q6ZNX1 250 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 RIMS4Q9H426 269 aaPredicted RBP20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 HRASLSQ9HDD0 168 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 C12orf4Q9NQ89 552 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 AK3Q9UIJ7 227 aa20.71■□□□□ 0.91
ECHDC3-201ENST00000379215 A6NNC1 897 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 NAT1P18440 290 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 MDH2P40926 338 aaKnown RBP20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 CCL8P80075 99 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 MEF2DQ14814 521 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 Q6P435 159 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 RTN4RL2Q86UN3 420 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 SPOCK3Q9BQ16 436 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 CBLN4Q9NTU7 201 aa20.7■□□□□ 0.9
ECHDC3-201ENST00000379215 HAND1O96004 215 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 LHBP01229 141 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 DUSP1P28562 367 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 SLC6A1P30531 599 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 SHEQ5VZ18 495 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 STEAP1BQ6NZ63 245 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 HOGA1Q86XE5 327 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 C1orf87Q8N0U7 546 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 GCSAMQ8N6F7 178 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 SUMF2Q8NBJ7 301 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 DUSP18Q8NEJ0 188 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 DPCDQ9BVM2 203 aaPredicted RBP20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 DPAGT1Q9H3H5 408 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 DNAJB11Q9UBS4 358 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 KMT2BQ9UMN6 2715 aaPredicted RBP20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 ZNF462Q96JM2 2506 aa20.69■□□□□ 0.9
ECHDC3-201ENST00000379215 POM121CA8CG34 1229 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 OR2H2O95918 312 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 CD74P04233 296 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 GMFBP60983 142 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 PDCD1Q15116 288 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 CCBE1Q6UXH8 406 aaPredicted RBP20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 NEK7Q8TDX7 302 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 TREM2Q9NZC2 230 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 ZNF581Q9P0T4 197 aa20.68■□□□□ 0.9
ECHDC3-201ENST00000379215 H7C1Q1 480 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 WNT9BO14905 357 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 PLET1Q6UQ28 207 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 WDR13Q9H1Z4 485 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 ZNF701Q9NV72 531 aaPredicted RBP20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 NLKQ9UBE8 527 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 TRAV24A0A0B4J272 114 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 UBE2QL1A1L167 161 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 RAB3DO95716 219 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 MT-ND4P03905 459 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 CD3DP04234 171 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 LMO1P25800 156 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 KCNJ3P48549 501 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 TAS2R46P59540 309 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 PAN3Q58A45 887 aaKnown RBP20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 SPRNQ5BIV9 151 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 OCEL1Q9H607 264 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 MCUBQ9NWR8 336 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 OR14J1Q9UGF5 321 aa20.67■□□□□ 0.9
ECHDC3-201ENST00000379215 AMY2BP19961 511 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 SRSF7Q16629 238 aaKnown RBP eCLIP20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 RNASE10Q5GAN6 216 aaKnown RBP20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 DTX2Q86UW9 622 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 GVQW1Q8N7I0 195 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 BEST4Q8NFU0 473 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 OR4C16Q8NGL9 310 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 ETAA1Q9NY74 926 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 WIPI2Q9Y4P8 454 aa20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 SPTBN1Q01082 2364 aaKnown RBP20.66■□□□□ 0.9
ECHDC3-201ENST00000379215 SLC33A1O00400 549 aaPredicted RBP20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 FCGR3AP08637 254 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 EGR1P18146 543 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 HLA-DMAP28067 261 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 BTCP35070 178 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 ZMYND11Q15326 602 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 OR4K15Q8NH41 348 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 RDH5Q92781 318 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 ST6GALNAC5Q9BVH7 336 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 RAB1BQ9H0U4 201 aa20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 CHMP1AQ9HD42 196 aaPredicted RBP20.65■□□□□ 0.9
ECHDC3-201ENST00000379215 DISC1C4P0D8 188 aa20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 SIRPB1O00241 398 aa20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 MUC1P15941 1255 aaPredicted RBP20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 PLA1AQ53H76 456 aa20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 BRICD5Q6PL45 260 aa20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 CACNG6Q9BXT2 260 aa20.64■□□□□ 0.9
ECHDC3-201ENST00000379215 RFPL4AA6NLU0 287 aa20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 OR2AT4A6NND4 320 aa20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 RFPL4AL1F8VTS6 287 aa20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 SSX4O60224 188 aa20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 MICBQ29980 383 aa20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 ZNF782Q6ZMW2 699 aaPredicted RBP20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 ZCCHC24Q8N2G6 241 aaKnown RBP20.64■□□□□ 0.89
ECHDC3-201ENST00000379215 BOLLQ8N9W6 283 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms