RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 BMP5P22003 454 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OTX2P32243 289 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 C1orf189Q5VU69 101 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 CARD17Q5XLA6 110 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OR4K15Q8NH41 348 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 POC1BQ8TC44 478 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 NR4A3Q92570 626 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 FAM71F1Q96KD3 344 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PNO1Q9NRX1 252 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 GLS2Q9UI32 602 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 IGSF23A1L1A6 192 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 TFF1P04155 84 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PLA2G2AP14555 144 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OMGP23515 440 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 SULT1A2P50226 295 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 LINC00310P59036 64 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 EIPR1Q53HC9 387 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 SLC35D3Q5M8T2 416 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 UTF1Q5T230 341 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 TERB2Q8NHR7 220 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 TRAV39A0A0B4J263 110 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 UBE2QL1A1L167 161 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 EDN3P14138 238 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 FUT3P21217 361 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ITGA3P26006 1051 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 MAPK3P27361 379 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 P2RY6Q15077 328 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 KRTCAP3Q53RY4 240 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 RNASE10Q5GAN6 216 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ABHD17BQ5VST6 288 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 FIP1L1Q6UN15 594 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 CDK20Q8IZL9 346 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 UBALD1Q8TB05 177 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 CHST11Q9NPF2 352 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 METTL1Q9UBP6 276 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 FBN2P35556 2912 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 TSPAN2O60636 221 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OR4A8P0C604 315 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF43P17038 809 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 HERPUD1Q15011 391 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF101Q8IZC7 436 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 CYB561D1Q8N8Q1 229 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ST6GALNAC3Q8NDV1 305 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 EXTL1Q92935 676 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PRTFDC1Q9NRG1 225 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PUS1Q9Y606 427 aaKnown RBP eCLIP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF462Q96JM2 2506 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 IGKV1D-13A0A0B4J2D9 117 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 LILRA1O75019 489 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 SNAPINO95295 136 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 OR5AC1P0C628 307 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 IGKV1-13P0DP09 117 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 CRABP1P29762 137 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 POU3F1Q03052 451 aaPredicted RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 EGR3Q06889 387 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 FOXE3Q13461 319 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 PIGTQ969N2 578 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 MRPL13Q9BYD1 178 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 NOSIPQ9Y314 301 aaKnown RBP6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 LIPGQ9Y5X9 500 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 COL6A6A6NMZ7 2263 aa6.32□□□□□ -1.4
GPCPD1-201ENST00000379019 ACACAQ13085 2346 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 H3BP45 60 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 HMGB3O15347 200 aaKnown RBP6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 SERPINA2P20848 420 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PTGDSP41222 190 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 NPBWR2P48146 333 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PRPS1P60891 318 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 RASGEF1BQ0VAM2 473 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 GGNBP1Q5YKI7 109 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PRSS54Q6PEW0 395 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PBOV1Q9GZY1 135 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 GPR84Q9NQS5 396 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 LSM5Q9Y4Y9 91 aaKnown RBP6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 ARPC4-TTLL3A0A0A6YYG9 625 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 CLEC18AA5D8T8 446 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 SFT2D2O95562 160 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PNMTP11086 282 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 CD46P15529 392 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 FCGR2CP31995 323 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF84P51523 738 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PAX9P55771 341 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 RND3P61587 244 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 BEND4Q6ZU67 534 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 ZNF584Q8IVC4 421 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 CLEC18CQ8NCF0 446 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 RAB39BQ96DA2 213 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 PHYHIPLQ96FC7 376 aa6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 FOXD3Q9UJU5 478 aaPredicted RBP6.31□□□□□ -1.4
GPCPD1-201ENST00000379019 KLF13Q9Y2Y9 288 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms