RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 APOA1P02647 267 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 SNRPBP14678 240 aaKnown RBP11.61□□□□□ -0.55
UPK1A-202ENST00000379013 PMELP40967 661 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 NPBWR2P48146 333 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 KCNJ3P48549 501 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 IKZF1Q13422 519 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
UPK1A-202ENST00000379013 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 C1QL2Q7Z5L3 287 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 LRRC28Q86X40 367 aaPredicted RBP11.61□□□□□ -0.55
UPK1A-202ENST00000379013 ZNF561Q8N587 486 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 SAMD12Q8N8I0 201 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 OR10K1Q8NGX5 313 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 C15orf40Q8WUR7 153 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 RAB39BQ96DA2 213 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 Q96M66 194 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 C1orf147Q96MC9 270 aaPredicted RBP11.61□□□□□ -0.55
UPK1A-202ENST00000379013 NEDD4LQ96PU5 975 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 GAL3ST1Q99999 423 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 TM2D1Q9BX74 207 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 BARHL1Q9BZE3 327 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 SLIRPQ9GZT3 109 aaKnown RBP11.61□□□□□ -0.55
UPK1A-202ENST00000379013 ZNF665Q9H7R5 613 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 IFT22Q9H7X7 185 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 RHBDL2Q9NX52 303 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 PTTG2Q9NZH5 202 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 COMMD3Q9UBI1 195 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 OR5V1Q9UGF6 321 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 PEX16Q9Y5Y5 336 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
UPK1A-202ENST00000379013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.55
UPK1A-202ENST00000379013 FUOMA2VDF0 154 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 OR7C1O76099 320 aaPredicted RBP11.6□□□□□ -0.55
UPK1A-202ENST00000379013 HAND1O96004 215 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 GLAP06280 429 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 ZNF44P15621 663 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 CD80P33681 288 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 PITPNBP48739 271 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 NPY4RP50391 375 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 GMFBP60983 142 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 IL13RA1P78552 427 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 QRFPP83859 136 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 FOXB2Q5VYV0 432 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 STUMQ69YW2 141 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 BAIAP2L2Q6UXY1 529 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 LINC00299Q6ZSB3 139 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 OR5D13Q8NGL4 314 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 C10orf105Q8TEF2 133 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 NKX3-1Q99801 234 aaPredicted RBP11.6□□□□□ -0.55
UPK1A-202ENST00000379013 FAM234AQ9H0X4 552 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 ATG5Q9H1Y0 275 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 ABCG5Q9H222 651 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 OR14J1Q9UGF5 321 aa11.6□□□□□ -0.55
UPK1A-202ENST00000379013 RFPL4AA6NLU0 287 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 FAM25AB3EWG3 89 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 FAM25CB3EWG5 89 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 FAM25GB3EWG6 89 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 RFPL4AL1F8VTS6 287 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 LYNX1G3V0Z9 82 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 DEGS1O15121 323 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 LDLRAD4O15165 306 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 GPR37O15354 613 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 TPPPO94811 219 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 LYNX1P0DP58 116 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 PSG2P11465 335 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 RPS2P15880 293 aaKnown RBP11.59□□□□□ -0.55
UPK1A-202ENST00000379013 EGR1P18146 543 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 GABRR1P24046 479 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 GABRA2P47869 451 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 MRPS15P82914 257 aaKnown RBP11.59□□□□□ -0.55
UPK1A-202ENST00000379013 UNC119Q13432 240 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 ZMYND11Q15326 602 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 ATPAF1Q5TC12 328 aaPredicted RBP11.59□□□□□ -0.55
UPK1A-202ENST00000379013 SFRP4Q6FHJ7 346 aaPredicted RBP11.59□□□□□ -0.55
UPK1A-202ENST00000379013 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 TMEM104Q8NE00 496 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 ANGPTL6Q8NI99 470 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 NXF2Q9GZY0 626 aaKnown RBP11.59□□□□□ -0.55
UPK1A-202ENST00000379013 WDR13Q9H1Z4 485 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 BANF2Q9H503 90 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
UPK1A-202ENST00000379013 VWC2LB2RUY7 222 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.58□□□□□ -0.56
UPK1A-202ENST00000379013 WNT9BO14905 357 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 TMPRSS2O15393 492 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 PDCD6O75340 191 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 CRLF1O75462 422 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 CA11O75493 328 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 CLPXO76031 633 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 PAHP00439 452 aa11.58□□□□□ -0.56
UPK1A-202ENST00000379013 FUT3P21217 361 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms