RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MFRPQ9BY79 579 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 C7orf77A4D0Y5 90 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CHEK1O14757 476 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SOCS1O15524 211 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SOX15O60248 233 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 IGF2P01344 180 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 BGLAPP02818 100 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 FBP1P09467 338 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 FABP4P15090 132 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SRD5A2P31213 254 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 RAC3P60763 192 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 HIF1ANQ9NWT6 349 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 TAAR3PQ9P1P4 343 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CFAP54Q96N23 3096 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SLC22A20A6NK97 555 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 HPP00738 406 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 RD3LP0DJH9 198 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 DEFA4P12838 97 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 ZNF17P17021 662 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 FSTP19883 344 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CSN1S1P47710 185 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 RNPS1Q15287 305 aaKnown RBP7.41□□□□□ -1.22
VPS36-201ENST00000378060 ZNF774Q6NX45 483 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 TRAT1Q6PIZ9 186 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 DGAT2L6Q6ZPD8 337 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 GNRHR2Q96P88 292 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 GPX7Q96SL4 187 aaPredicted RBP7.41□□□□□ -1.22
VPS36-201ENST00000378060 SF3B5Q9BWJ5 86 aaKnown RBP7.41□□□□□ -1.22
VPS36-201ENST00000378060 DEFB127Q9H1M4 99 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 WDR13Q9H1Z4 485 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SIRT7Q9NRC8 400 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 IL2RAP01589 272 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 FAM157BP0CG42 384 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CCL11P51671 97 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CCL7P80098 99 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 Q6ZS52 159 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SCCPDHQ8NBX0 429 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SLC26A10Q8NG04 563 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 OR10V1Q8NGI7 309 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 CA10Q9NS85 328 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 MPC1Q9Y5U8 109 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 UNC13CQ8NB66 2214 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CACNA1IQ9P0X4 2223 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 HSBP1O75506 76 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 NGFP01138 241 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 OR5G3P0C626 314 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 COL9A1P20849 921 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 MPGP29372 298 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CNN1P51911 297 aaKnown RBP7.4□□□□□ -1.22
VPS36-201ENST00000378060 NANOS3P60323 173 aaKnown RBP7.4□□□□□ -1.22
VPS36-201ENST00000378060 DMWDQ09019 674 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 FOXO1Q12778 655 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 PRDX4Q13162 271 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 FZD5Q13467 585 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 MICBQ29980 383 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CLEC12BQ2HXU8 276 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 PABPC1L2AQ5JQF8 200 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 TIPARPQ7Z3E1 657 aaKnown RBP7.4□□□□□ -1.22
VPS36-201ENST00000378060 NRTNQ99748 197 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 FOXQ1Q9C009 403 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 KCNK15Q9H427 330 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 PROCRQ9UNN8 238 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 LOXL2Q9Y4K0 774 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.22
VPS36-201ENST00000378060 TRBV5-5A0A0J9YX44 114 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 OR5H15A6NDH6 313 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 AQP7O14520 342 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CXCL2P19875 107 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CD81P60033 236 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 WIPI1Q5MNZ9 446 aaPredicted RBP7.4□□□□□ -1.22
VPS36-201ENST00000378060 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CBLN2Q8IUK8 224 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 POM121L2Q96KW2 1035 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 ZFP64Q9NPA5 681 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 CBY1Q9Y3M2 126 aa7.4□□□□□ -1.22
VPS36-201ENST00000378060 XKRY2A2RUG3 117 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 K7EQS6 105 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 CNIH1O95406 144 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 HRASP01112 189 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 CTRB1P17538 263 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 GALR1P47211 349 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 POLR2GP62487 172 aaKnown RBP eCLIP7.4□□□□□ -1.23
VPS36-201ENST00000378060 ZNF816Q0VGE8 651 aaPredicted RBP7.4□□□□□ -1.23
VPS36-201ENST00000378060 VAX1Q5SQQ9 334 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 CTRB2Q6GPI1 263 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 TMEM211Q6ICI0 200 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 HOGA1Q86XE5 327 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 NEIL1Q96FI4 390 aaPredicted RBP7.4□□□□□ -1.23
VPS36-201ENST00000378060 PGLYRP3Q96LB9 341 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 NPAS1Q99742 590 aa7.4□□□□□ -1.23
VPS36-201ENST00000378060 C1QTNF6Q9BXI9 259 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms