RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 BSXQ3C1V8 233 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 ANKRD55Q3KP44 614 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 H1FOOQ8IZA3 346 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 LYPD3O95274 346 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 ARTNQ5T4W7 220 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 YRDCQ86U90 279 aaKnown RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 OR8G5Q8NG78 346 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 RDH5Q92781 318 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 NEIL1Q96FI4 390 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 MRPL22Q9NWU5 206 aaKnown RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 A0A1B0GU03 582 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 A0A1W2PNV4 684 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 WDR1O75083 606 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 CYB5R3P00387 301 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 HEXAP06865 529 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 DANCRP0C864 163 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 MGST1P10620 155 aaKnown RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF658BQ4V348 819 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 LBHQ53QV2 105 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 LANCL3Q6ZV70 420 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 SF3B5Q9BWJ5 86 aaKnown RBP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 C5orf66Q9H5L9 145 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 FAM206AQ9NX38 181 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 ACTL6BO94805 426 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 TBX6O95947 436 aaPredicted RBP7.71□□□□□ -1.17
PCDH9-202ENST00000377865 PPYP01298 95 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 ATP6V0CP27449 155 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 GABRA2P47869 451 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 CDX1P47902 265 aaPredicted RBP7.71□□□□□ -1.17
PCDH9-202ENST00000377865 GPM6AP51674 278 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 C2orf68Q2NKX9 166 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 TIGITQ495A1 244 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 LYZL2Q7Z4W2 148 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 BATF2Q8N1L9 274 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 RNF222A6NCQ9 220 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 C5orf67F2Z3F1 127 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 KCNAB3O43448 404 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 C9orf40Q8IXQ3 194 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 C8orf44Q96CB5 159 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 SMIM8Q96KF7 97 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 KCNK17Q96T54 332 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 PRSS50Q9UI38 385 aa7.71□□□□□ -1.17
PCDH9-202ENST00000377865 GOLGA4Q13439 2230 aaKnown RBP7.71□□□□□ -1.18
PCDH9-202ENST00000377865 METTL12A8MUP2 240 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TSPAN2O60636 221 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 PNPP00491 289 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF439Q8NDP4 499 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 OR10G3Q8NGC4 313 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 OR2T10Q8NGZ9 312 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 NPIPB13A6NJU9 1138 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM14DPA8MWL7 114 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 NPIPB4C9JG80 1138 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 F8VVB4 439 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 F8VWA3 439 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 H3BP45 60 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TCAPO15273 167 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 FGF16O43320 207 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 GPR12P47775 334 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF92Q03936 586 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 SSX7Q7RTT5 188 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TMPRSS7Q7RTY8 843 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 LAMTOR5O43504 91 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 CXCL13O43927 109 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 HLA-GP17693 338 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 KIR2DL1P43626 348 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-202ENST00000377865 ARG2P78540 354 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 CEACAM16Q2WEN9 425 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 M1APQ8TC57 530 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 OR10C1Q96KK4 312 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 MS4A10Q96PG2 267 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 MENTQ9BUN1 341 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TUBA4BQ9H853 241 aa7.71□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM30CPA0ZSE6 113 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 NKX2-6A6NCS4 301 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 RPL36A-HNRNPH2H7BZ11 118 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 TOX3O15405 576 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CELA2BP08218 269 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FCGR3AP08637 254 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FBP1P09467 338 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 OR10J1P30954 320 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM50BP56557 158 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 PRDX4Q13162 271 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 ATRAIDQ6UW56 229 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF808Q8N4W9 903 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CADM4Q8NFZ8 388 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 GALMQ96C23 342 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 AICDAQ9GZX7 198 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CACNG5Q9UF02 275 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 ADAM11O75078 769 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 GCGP01275 180 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FOLR2P14207 255 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FAM3BP58499 235 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 GNG3P63215 75 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF154Q13106 437 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CLN3Q13286 438 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 HFEQ30201 348 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF774Q6NX45 483 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms