RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 FUNDC2Q9BWH2 189 aa10.7□□□□□ -0.7
CLCN6-205ENST00000376492 NECAP2Q9NVZ3 263 aa10.7□□□□□ -0.7
CLCN6-205ENST00000376492 PLXNB1O43157 2135 aa10.7□□□□□ -0.7
CLCN6-205ENST00000376492 TMEM127O75204 238 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 TFF1P04155 84 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 AMY2BP19961 511 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 PAX6P26367 422 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 CDK5R1Q15078 307 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 MICBQ29980 383 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 YIF1BQ5BJH7 314 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 DMRTC1Q5HYR2 192 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 ATPAF1Q5TC12 328 aaPredicted RBP10.69□□□□□ -0.7
CLCN6-205ENST00000376492 PLCXD3Q63HM9 321 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 CMTM4Q8IZR5 234 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 ZNF671Q8TAW3 534 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 ISG20L2Q9H9L3 353 aaKnown RBP10.69□□□□□ -0.7
CLCN6-205ENST00000376492 STUB1Q9UNE7 303 aa10.69□□□□□ -0.7
CLCN6-205ENST00000376492 SF3B6Q9Y3B4 125 aaKnown RBP10.69□□□□□ -0.7
CLCN6-205ENST00000376492 LOC107986453A0A1B0GWG9 222 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 TRDV1A0A1B0GX56 115 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 PQLC2LA1A4F0 135 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 MEGF11A6BM72 1044 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 A6NIN4 97 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 TMEM212A6NML5 194 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 OR4C45A6NMZ5 311 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 RHBDL1O75783 438 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 GATBO75879 557 aaKnown RBP10.68□□□□□ -0.7
CLCN6-205ENST00000376492 HSMCR30P0CW71 290 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 ALKBH1Q13686 389 aaKnown RBP10.68□□□□□ -0.7
CLCN6-205ENST00000376492 SSX1Q16384 188 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 ZNF573Q86YE8 665 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 OR4C13Q8NGP0 309 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 AQP3Q92482 292 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
CLCN6-205ENST00000376492 PHF21AQ96BD5 680 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 ISOC1Q96CN7 298 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 DCTN5Q9BTE1 182 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 GPR173Q9NS66 373 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 GSTK1Q9Y2Q3 226 aa10.68□□□□□ -0.7
CLCN6-205ENST00000376492 AKR7A2O43488 359 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 NDUFB3O43676 98 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 SC5DO75845 299 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 ACAA1P09110 424 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-205ENST00000376492 VSIG10L2P0DP72 767 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 VSIG8P0DPA2 414 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 CELP19835 753 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 KIR2DS4P43632 304 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 GMFBP60983 142 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 UBE2V2Q15819 145 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 CTF1Q16619 201 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 VAX1Q5SQQ9 334 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 GPR107Q5VW38 600 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 C11orf87Q6NUJ2 197 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 HAGHLQ6PII5 290 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-205ENST00000376492 LINC00299Q6ZSB3 139 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 SLC36A1Q7Z2H8 476 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 CLVS1Q8IUQ0 354 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-205ENST00000376492 BEND2Q8NDZ0 799 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 OR5T2Q8NGG2 359 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 OR2T6Q8NHC8 308 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 PP6455Q8WZ26 134 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 PGLYRP3Q96LB9 341 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 SSX3Q99909 188 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 CHST5Q9GZS9 411 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 DNTTIP1Q9H147 329 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 WDR13Q9H1Z4 485 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 MMP28Q9H239 520 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 PLEKHA1Q9HB21 404 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLCN6-205ENST00000376492 RASL12Q9NYN1 266 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 SSR3Q9UNL2 185 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 MAB21L2Q9Y586 359 aa10.67□□□□□ -0.7
CLCN6-205ENST00000376492 TRBV2A0A0J9YWF9 115 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 E9PI62 339 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 H3BSH0 61 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 J3QT63 122 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 CHST1O43916 411 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 AIREO43918 545 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 NOS1APO75052 506 aaPredicted RBP10.66□□□□□ -0.7
CLCN6-205ENST00000376492 LALBAP00709 142 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 GLRA1P23415 457 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 MPZP25189 248 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 MAPK3P27361 379 aaPredicted RBP10.66□□□□□ -0.7
CLCN6-205ENST00000376492 HAAOP46952 286 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 UBE2E1P51965 193 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 FUT6P51993 359 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 LIPKQ5VXJ0 399 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 STUMQ69YW2 141 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 HCP5Q6MZN7 132 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 CRIP3Q6Q6R5 217 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 SLC16A12Q6ZSM3 486 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 UTS2BQ765I0 119 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 ADAT3Q96EY9 351 aaPredicted RBP10.66□□□□□ -0.7
CLCN6-205ENST00000376492 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 COMMD4Q9H0A8 199 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 SNTG1Q9NSN8 517 aa10.66□□□□□ -0.7
CLCN6-205ENST00000376492 HHLA2Q9UM44 414 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms