RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MTCP1P56278 107 aa18.56■□□□□ 0.56
C9orf47-202ENST00000375850 ATP6AP1Q15904 470 aa18.56■□□□□ 0.56
C9orf47-202ENST00000375850 RFKQ969G6 155 aa18.56■□□□□ 0.56
C9orf47-202ENST00000375850 GPR61Q9BZJ8 451 aa18.56■□□□□ 0.56
C9orf47-202ENST00000375850 GABARAPL1Q9H0R8 117 aa18.56■□□□□ 0.56
C9orf47-202ENST00000375850 RBFOX1Q9NWB1 397 aaKnown RBP18.56■□□□□ 0.56
C9orf47-202ENST00000375850 OOSP1A8MZH6 123 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 MITFO75030 526 aaPredicted RBP18.55■□□□□ 0.56
C9orf47-202ENST00000375850 JUNBP17275 347 aaPredicted RBP18.55■□□□□ 0.56
C9orf47-202ENST00000375850 PRKACAP17612 351 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 CD34P28906 385 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 EPHA2P29317 976 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 OR3A1P47881 315 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 POU3F4P49335 361 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 CCDC144NLQ6NUI1 221 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 OR10H4Q8NGA5 316 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 OR8J1Q8NGP2 316 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 RBM14Q96PK6 669 aaKnown RBP18.55■□□□□ 0.56
C9orf47-202ENST00000375850 SLC25A33Q9BSK2 321 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 HMG20AQ9NP66 347 aa18.55■□□□□ 0.56
C9orf47-202ENST00000375850 EXOSC4Q9NPD3 245 aaKnown RBP18.55■□□□□ 0.56
C9orf47-202ENST00000375850 MPIG6BO95866 241 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 IGLV1-47P01700 117 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 ATF1P18846 271 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 BCL3P20749 454 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 NPBWR2P48146 333 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 VAX1Q5SQQ9 334 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 KCTD20Q7Z5Y7 419 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 PRSS35Q8N3Z0 413 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 NEK6Q9HC98 313 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 IL36RNQ9UBH0 155 aa18.54■□□□□ 0.56
C9orf47-202ENST00000375850 H3BSH0 61 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 ISG15P05161 165 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 CSN2P05814 226 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 OCM2P0CE71 109 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 OCMP0CE72 109 aaPredicted RBP18.53■□□□□ 0.56
C9orf47-202ENST00000375850 CDK2P24941 298 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 FASP25445 335 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 LMO1P25800 156 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 DUSP1P28562 367 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 MNDAP41218 407 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 ISL1P61371 349 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 PDZK1IP1Q13113 114 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 TCTEX1D4Q5JR98 221 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 CCDC121Q6ZUS5 278 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 CHST4Q8NCG5 386 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 MYDGFQ969H8 173 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 PCDHB16Q9NRJ7 776 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 DSCAML1Q8TD84 2053 aa18.53■□□□□ 0.56
C9orf47-202ENST00000375850 TOR1AO14656 332 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 MMP23AO75900 390 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 LPLP06858 475 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 ZNF20P17024 532 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 PRRX1P54821 245 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 KPNB1Q14974 876 aaKnown RBP18.52■□□□□ 0.56
C9orf47-202ENST00000375850 ABCA11PQ4W5N1 156 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 PRAMEF5Q5TYX0 476 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 OR4D6Q8NGJ1 314 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 ADAT3Q96EY9 351 aaPredicted RBP18.52■□□□□ 0.56
C9orf47-202ENST00000375850 OPALINQ96PE5 141 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 COMMD4Q9H0A8 199 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.52■□□□□ 0.56
C9orf47-202ENST00000375850 GNG8Q9UK08 70 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 HHLA2Q9UM44 414 aa18.52■□□□□ 0.56
C9orf47-202ENST00000375850 A0A087X0M5 115 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 IGKV1-9A0A0C4DH69 117 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 A0A1B0GX30 115 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 SIRPB1O00241 398 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 OR2H2O95918 312 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 FCGR1AP12314 374 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 PTGFRP43088 359 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 KIR3DL2P43630 455 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 HLA-DRB5Q30154 266 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 SAXO1Q8IYX7 474 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 SLC7A6OSQ96CW6 309 aaPredicted RBP18.51■□□□□ 0.55
C9orf47-202ENST00000375850 MBOAT4Q96T53 435 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 GSTK1Q9Y2Q3 226 aa18.51■□□□□ 0.55
C9orf47-202ENST00000375850 BUB1B-PAK6H3BSN5 160 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 KDM4BO94953 1096 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 MT-ND2P03891 347 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 TPTE2P1Q5T6R2 138 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 FDX2Q6P4F2 183 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 OSR2Q8N2R0 312 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 OR51D1Q8NGF3 324 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 OR2G2Q8NGZ5 317 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 DPF1Q92782 380 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 CIB1Q99828 191 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 GABARAPL3Q9BY60 117 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 OR6C3Q9NZP0 311 aa18.5■□□□□ 0.55
C9orf47-202ENST00000375850 ODAMA1E959 279 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 ZNF729A6NN14 1252 aaPredicted RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 K7EIL1 84 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 APOL3O95236 402 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 RPSAP08865 295 aaKnown RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 FAM106CPP0CH98 169 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 CD24P25063 80 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 SNU13P55769 128 aaKnown RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 DCTN2Q13561 401 aaKnown RBP18.49■□□□□ 0.55
C9orf47-202ENST00000375850 THNSL2Q86YJ6 484 aa18.49■□□□□ 0.55
C9orf47-202ENST00000375850 RDH10Q8IZV5 341 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms