RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RPL24P83731 157 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 PSG5Q15238 335 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 GABRG3Q99928 467 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
COL4A1-201ENST00000375820 CYSLTR2Q9NS75 346 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 RABAC1Q9UI14 185 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
COL4A1-201ENST00000375820 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR4C46A6NHA9 309 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 ZP3P21754 424 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 MPV17LQ2QL34 196 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 Q6ZN92 141 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR10A7Q8NGE5 316 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR5A2Q8NGI9 324 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 GRAMD2BQ96HH9 432 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
COL4A1-201ENST00000375820 TMED3Q9Y3Q3 217 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 ATP5SQ99766 215 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 TFPI2P48307 235 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 FAM60AQ9NP50 221 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 IL20Q9NYY1 176 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 YBX2Q9Y2T7 364 aaKnown RBP12.13□□□□□ -0.47
COL4A1-201ENST00000375820 hADV38S2A0JD32 116 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 CDC42EP2O14613 210 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 NAAAQ02083 359 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 HIKESHIQ53FT3 197 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 OR1L6Q8NGR2 347 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 R3HDM4Q96D70 268 aa12.13□□□□□ -0.47
COL4A1-201ENST00000375820 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 CDIPTO14735 213 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SOCS1O15524 211 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 MPC2O95563 127 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 IGKV3-15P01624 115 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 RPL30P62888 115 aaKnown RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 RAB1BQ9H0U4 201 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 RAB7AP51149 207 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SSX1Q16384 188 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 AKIRIN1Q9H9L7 192 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TMEM183BQ1AE95 376 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SOSTQ9BQB4 213 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 ZNF275Q9NSD4 429 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TBX21Q9UL17 535 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 VSIG4Q9Y279 399 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 HRKO00198 91 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 WNT3P56703 355 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 ZDHHC22Q8N966 263 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 RND1Q92730 232 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 GNG7O60262 68 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SLC6A1P30531 599 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 TMEM33P57088 247 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SSPNQ14714 243 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 NSUN5P2Q63ZY6 315 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 SH2D2AQ9NP31 389 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 ZFP64Q9NPA5 681 aa12.12□□□□□ -0.47
COL4A1-201ENST00000375820 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
COL4A1-201ENST00000375820 GSTZ1O43708 216 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-201ENST00000375820 RNASE1P07998 156 aaKnown RBP12.11□□□□□ -0.47
COL4A1-201ENST00000375820 IL9P15248 144 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 ACP1P24666 158 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
COL4A1-201ENST00000375820 INPP5JQ15735 1006 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-201ENST00000375820 C21orf62-AS1Q17RA5 79 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 C1orf210Q8IVY1 113 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 VSTM2LQ96N03 204 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 LANCL1O43813 399 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 EML2O95834 649 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 CD300CQ08708 224 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
COL4A1-201ENST00000375820 CD3EP07766 207 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 CCL4P13236 92 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 GABRA1P14867 456 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 SLC25A30Q5SVS4 291 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 ZNF547Q8IVP9 402 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 SCMH1Q96GD3 660 aa12.11□□□□□ -0.47
COL4A1-201ENST00000375820 NKX2-2O95096 273 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms