RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 THRSPQ92748 146 aa10□□□□□ -0.81
LSM2-208ENST00000375661 SLAMF9Q96A28 289 aa10□□□□□ -0.81
LSM2-208ENST00000375661 WDFY2Q96P53 400 aa10□□□□□ -0.81
LSM2-208ENST00000375661 TBX15Q96SF7 602 aa10□□□□□ -0.81
LSM2-208ENST00000375661 NRIP2Q9BQI9 281 aa10□□□□□ -0.81
LSM2-208ENST00000375661 DPAGT1Q9H3H5 408 aa10□□□□□ -0.81
LSM2-208ENST00000375661 C16orf95Q9H693 158 aa10□□□□□ -0.81
LSM2-208ENST00000375661 NEK6Q9HC98 313 aa10□□□□□ -0.81
LSM2-208ENST00000375661 CKLFQ9UBR5 152 aa10□□□□□ -0.81
LSM2-208ENST00000375661 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 TRDV1A0A1B0GX56 115 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 NDUFA2O43678 99 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 ANGPTL7O43827 346 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 TSPAN15O95858 294 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 SFTPBP07988 381 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 SRMP19623 302 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 AMY2BP19961 511 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 GLRA1P23415 457 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 IER3P46695 156 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 GMFBP60983 142 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 HSD17B12Q53GQ0 312 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 DDI2Q5TDH0 399 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 METTL11BQ5VVY1 283 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 HIST2H2BDQ6DRA6 164 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 FAM90A1Q86YD7 464 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 OR5D18Q8NGL1 313 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 PHYHIPQ92561 330 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 YIPF6Q96EC8 236 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 OR51E2Q9H255 320 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 SNTG1Q9NSN8 517 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 POLDIP2Q9Y2S7 368 aa9.99□□□□□ -0.81
LSM2-208ENST00000375661 TRAV38-1A0A0B4J264 116 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 SHISA3A0PJX4 238 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 MAGEB3O15480 346 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 KDM4BO94953 1096 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 GYPAP02724 150 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 CD37P11049 281 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 MUC1P15941 1255 aaPredicted RBP9.98□□□□□ -0.81
LSM2-208ENST00000375661 CD36P16671 472 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 BCL3P20749 454 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 GALP22466 123 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 GADD45AP24522 165 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 ZNF93P35789 620 aaPredicted RBP9.98□□□□□ -0.81
LSM2-208ENST00000375661 NPBWR2P48146 333 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 ACP7Q6ZNF0 438 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 SATL1Q86VE3 508 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 MKXQ8IYA7 352 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 CEP19Q96LK0 163 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 GFI1Q99684 422 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 MRPS26Q9BYN8 205 aaKnown RBP9.98□□□□□ -0.81
LSM2-208ENST00000375661 VCX3AQ9NNX9 186 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 RASL12Q9NYN1 266 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 NLKQ9UBE8 527 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 ZNF222Q9UK12 451 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 STUB1Q9UNE7 303 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
LSM2-208ENST00000375661 MEGF11A6BM72 1044 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 ARL6IP5O75915 188 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 TSPAN9O75954 239 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 ECDO95905 644 aaPredicted RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 IGHV4-59P01825 116 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 TFF1P04155 84 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 TFAP2AP05549 437 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 CSF1P09603 554 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 TMEM225BP0DP42 221 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 FGF9P31371 208 aaPredicted RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 OR3A4PP47883 348 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 MICBQ29980 383 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 KPRPQ5T749 579 aaPredicted RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 STUMQ69YW2 141 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 ASCL4Q6XD76 172 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 REC114Q7Z4M0 266 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 CDH26Q8IXH8 852 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 SAXO1Q8IYX7 474 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 PXT1Q8NFP0 134 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 ANGPTL6Q8NI99 470 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 FAM110DQ8TAY7 271 aaPredicted RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 TNFAIP8L1Q8WVP5 186 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 LHX4Q969G2 390 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 C12orf43Q96C57 262 aaKnown RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 DMRTB1Q96MA1 342 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 GPER1Q99527 375 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 TXNL4BQ9NX01 149 aaKnown RBP9.97□□□□□ -0.81
LSM2-208ENST00000375661 CTSZQ9UBR2 303 aa9.97□□□□□ -0.81
LSM2-208ENST00000375661 IGKV1D-17A0A075B6S4 117 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 A0A0U1RQK1 487 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 A0A1B0GW55 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 BTBD17A6NE02 478 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 ADAM20O43506 726 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 FCN3O75636 299 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 NXPH2O95156 264 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 CYB5AP00167 134 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms