RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 C16orf97H3BN30 126 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 CCL21O00585 134 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 OR13C7P0DN81 318 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 CD80P33681 288 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 Q3ZCU0 254 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 TOR2AQ5JU69 321 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 RBPMSQ93062 196 aaKnown RBP15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 TMEM229AB2RXF0 380 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 AQP7O14520 342 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 GPR37O15354 613 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 H2AFB1P0C5Y9 115 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 HFEQ30201 348 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 OR10P1Q8NGE3 313 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 OR4D10Q8NGI6 311 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 ERGIC1Q969X5 290 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 CXXC4Q9H2H0 198 aa15.67■□□□□ 0.1
PTPDC1-202ENST00000375360 ACACBO00763 2458 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 CYB5BO43169 146 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 FCGR3BO75015 233 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 UBE2KP61086 200 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 TAGLNQ01995 201 aaKnown RBP15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 RAB32Q13637 225 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SNAI3Q3KNW1 292 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SVBPQ8N300 66 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 NPAS1Q99742 590 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 HLA-DQB1P01920 261 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 HOXA6P31267 233 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 RTL8BQ17RB0 113 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 INO80CQ6PI98 192 aaPredicted RBP15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 TPRX1Q8N7U7 411 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 ST7LQ8TDW4 575 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SSX3Q99909 188 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 PSENENQ9NZ42 101 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 PTPRDP23468 1912 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A1W2PRD5 423 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A1W2PRF3 423 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 A0A1W2PRM7 423 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SHISA3A0PJX4 238 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 CLEC18AA5D8T8 446 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SNAPINO95295 136 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 CD3EP07766 207 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 CCL8P80075 99 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 TMEM211Q6ICI0 200 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 C11orf87Q6NUJ2 197 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 CLEC18CQ8NCF0 446 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 C20orf24Q9BUV8 137 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 HBE1P02100 147 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 SUCLG1P53597 346 aaKnown RBP15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 MOGAT2Q3SYC2 334 aa15.66■□□□□ 0.1
PTPDC1-202ENST00000375360 IGLV3-12A0A075B6K2 115 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 GABRA4P48169 554 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 C11orf91Q3C1V1 193 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 CD200R1LQ6Q8B3 271 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 Q6ZRG5 221 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 TIMP4Q99727 224 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 OSGIN2Q9Y236 505 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 RCL1Q9Y2P8 373 aaKnown RBP15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 C1orf196B1AJZ1 125 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 ZIC3O60481 467 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 P2RX3P56373 397 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 UBAC2Q8NBM4 344 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 ZNF75AQ96N20 296 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 PHF3Q92576 2039 aaKnown RBP15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 SHANK1Q9Y566 2161 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 RAG2P55895 527 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 COL19A1Q14993 1142 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 OR5A2Q8NGI9 324 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 POC1BQ8TC44 478 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 ST8SIA2Q92186 375 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 OR2D2Q9H210 308 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 PLEKHA2Q9HB19 425 aa15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 PURGQ9UJV8 347 aaKnown RBP15.65■□□□□ 0.1
PTPDC1-202ENST00000375360 SFT2D2O95562 160 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 KLK2P20151 261 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 HAGHQ16775 308 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 J3QT63 122 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 OPN1MWP04001 364 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 OPN1MW2P0DN77 364 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 OPN1MW3P0DN78 364 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 MOB3BQ86TA1 216 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 STRAPQ9Y3F4 350 aaKnown RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 KRBOX1C9JBD0 128 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 RRASP10301 218 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 TMEM123Q8N131 208 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 ZNF426Q9BUY5 554 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 KCNK7Q9Y2U2 307 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 TRBV5-5A0A0J9YX44 114 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 RFPL4AA6NLU0 287 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 ZNF724A8MTY0 619 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 RFPL4AL1F8VTS6 287 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 KLF7O75840 302 aaPredicted RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 SCAF4O95104 1147 aaKnown RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 DHODHQ02127 395 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 ZFP36L1Q07352 338 aaKnown RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 GGNBP1Q5YKI7 109 aa15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 RBMS3Q6XE24 437 aaKnown RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 ZNF837Q96EG3 531 aaPredicted RBP15.64■□□□□ 0.09
PTPDC1-202ENST00000375360 A0A1W2PNV4 684 aa15.63■□□□□ 0.09
PTPDC1-202ENST00000375360 COX7A1P24310 79 aa15.63■□□□□ 0.09
PTPDC1-202ENST00000375360 EIF2S3LQ2VIR3 472 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms