RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 WDR13Q9H1Z4 485 aa13.77□□□□□ -0.21
H2AFX-201ENST00000375167 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
H2AFX-201ENST00000375167 HECTD4Q9Y4D8 3996 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 A0A0U1RQV5 110 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 hCG_38984A0A1B0GV85 526 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 ANKRD30BLA7E2S9 258 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 FAM90A22PA8MWA6 464 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 CDIPTO14735 213 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 MAGEB4O15481 346 aaPredicted RBP13.76□□□□□ -0.21
H2AFX-201ENST00000375167 SULT1C4O75897 302 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 KRT8P05787 483 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 HCKP08631 526 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 JUNBP17275 347 aaPredicted RBP13.76□□□□□ -0.21
H2AFX-201ENST00000375167 GABRA2P47869 451 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 CAPZA1P52907 286 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 RAB40BQ12829 278 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 ZNF684Q5T5D7 378 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 SSX6Q7RTT6 188 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 C11orf42Q8N5U0 333 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 NUFIP1Q9UHK0 495 aaKnown RBP13.76□□□□□ -0.21
H2AFX-201ENST00000375167 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
H2AFX-201ENST00000375167 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 J3QRE1 110 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 SRSF10O75494 262 aaKnown RBP13.75□□□□□ -0.21
H2AFX-201ENST00000375167 OR3A4PP47883 348 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 ISL1P61371 349 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 RPL31P62899 125 aaKnown RBP13.75□□□□□ -0.21
H2AFX-201ENST00000375167 ZNF91Q05481 1191 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 LDLRAD2Q5SZI1 272 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 FAM27D1Q5T7N8 215 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 PLEKHG7Q6ZR37 379 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 EGFL6Q8IUX8 553 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 FTMTQ8N4E7 242 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 YIPF7Q8N8F6 280 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 ZNRF1Q8ND25 227 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 CSNK2A3Q8NEV1 391 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 OR8U1Q8NH10 309 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 ITFG2Q969R8 447 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 SLC25A33Q9BSK2 321 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 PBOV1Q9GZY1 135 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
H2AFX-201ENST00000375167 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
H2AFX-201ENST00000375167 R4GMQ9 66 aa13.75□□□□□ -0.21
H2AFX-201ENST00000375167 SH2D7A6NKC9 451 aaPredicted RBP13.74□□□□□ -0.21
H2AFX-201ENST00000375167 OR2AT4A6NND4 320 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 LOC110117498-PIK3R3F6TDL0 507 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 DBTP11182 482 aaKnown RBP13.74□□□□□ -0.21
H2AFX-201ENST00000375167 GNALP38405 381 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 ZNF85Q03923 595 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
H2AFX-201ENST00000375167 DYNC1I2Q13409 638 aaKnown RBP13.74□□□□□ -0.21
H2AFX-201ENST00000375167 ACBD7Q8N6N7 88 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 OR10Z1Q8NGY1 313 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 HAVCR2Q8TDQ0 301 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 APH1BQ8WW43 257 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 LGALS12Q96DT0 336 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 TLNRD1Q9H1K6 362 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 MOB1AQ9H8S9 216 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 NLKQ9UBE8 527 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 SNX5Q9Y5X3 404 aa13.74□□□□□ -0.21
H2AFX-201ENST00000375167 DAPL1A0PJW8 107 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 EFCAB10A6NFE3 127 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
H2AFX-201ENST00000375167 LY6G6CO95867 125 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 CCL3L1P16619 93 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 MYL12AP19105 171 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 INSL3P51460 131 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 ACTA2P62736 377 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 ACTG2P63267 376 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 BCL2L15Q5TBC7 163 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 FAM220AQ7Z4H9 259 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 KCTD20Q7Z5Y7 419 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 ELMOD2Q8IZ81 293 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 MRPS18AQ9NVS2 196 aaKnown RBP13.73□□□□□ -0.21
H2AFX-201ENST00000375167 OR52A1Q9UKL2 312 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 GTF2A1LQ9UNN4 478 aa13.73□□□□□ -0.21
H2AFX-201ENST00000375167 RPP14O95059 124 aaKnown RBP13.72□□□□□ -0.21
H2AFX-201ENST00000375167 IGLV3-1P01715 115 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 TTRP02766 147 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 ATP6V1B1P15313 513 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 ACKR3P25106 362 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 DCKP27707 260 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 MAP2K3P46734 347 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 OR11H6Q8NGC7 330 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 NDNFQ8TB73 568 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 OR51E1Q8TCB6 317 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 SPATA25Q9BR10 227 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 GPR84Q9NQS5 396 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 CNOT2Q9NZN8 540 aaKnown RBP13.72□□□□□ -0.21
H2AFX-201ENST00000375167 GNG8Q9UK08 70 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 TPRKBQ9Y3C4 175 aa13.72□□□□□ -0.21
H2AFX-201ENST00000375167 RHBDD3Q9Y3P4 386 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms