RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 VAMP1P23763 118 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 C3orf36Q3SXR2 165 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 C1QTNF12Q5T7M4 302 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 LIN54Q6MZP7 749 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 BRICD5Q6PL45 260 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 DHRS11Q6UWP2 260 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 RPRMLQ8N4K4 120 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 GTF3AQ92664 365 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 HS3ST6Q96QI5 342 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 ZNF2Q9BSG1 426 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 ADAT1Q9BUB4 502 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 C1QTNF6Q9BXI9 259 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 IFT22Q9H7X7 185 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 IGHV1-18A0A0C4DH31 117 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 TMEM210A6NLX4 147 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 NAPSAO96009 420 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 GLAP06280 429 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 PRKACAP17612 351 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 KITLGP21583 273 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 CALCRP30988 508 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 PDCD1Q15116 288 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 TIMM23BQ5SRD1 257 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 ZNF474Q6S9Z5 364 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 Q6ZPA2 131 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 WDR86Q86TI4 376 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 Q8IYB0 196 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 FAM58AQ8N1B3 248 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 BATF2Q8N1L9 274 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 Q8NA96 180 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 HEXA-AS1Q9H8Q6 139 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 POLDIP2Q9Y2S7 368 aa15.35■□□□□ 0.05
HLA-DQB1-201ENST00000374943 IGHV2OR16-5A0A0B4J2B6 119 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 CTSDP07339 412 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 C4BPBP20851 252 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 MPV17P39210 176 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 ZNF81P51508 661 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 SLC22A25Q6T423 547 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 IL36RNQ9UBH0 155 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 SLC23A1Q9UHI7 598 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 PURGQ9UJV8 347 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 CEP295Q9C0D2 2601 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 CHD6Q8TD26 2715 aa15.34■□□□□ 0.05
HLA-DQB1-201ENST00000374943 ZGRF1Q86YA3 2104 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ACAA1P09110 424 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GLI4P10075 376 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RPS2P15880 293 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 NFYAP23511 347 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GMFBP60983 142 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SEC61A1P61619 476 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SUPT4H1P63272 117 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FGL1Q08830 312 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 IKZF1Q13422 519 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ALKBH6Q3KRA9 238 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 OR8G5Q8NG78 346 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CASTOR1Q8WTX7 329 aa15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 C14orf166Q9Y224 244 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SHANK1Q9Y566 2161 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FAM221AA4D161 298 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RFPL4AA6NLU0 287 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 C1QTNF9BB2RNN3 333 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MCRIP1C9JLW8 97 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RFPL4AL1F8VTS6 287 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RHBDL1O75783 438 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 C1QTNF9P0C862 333 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PGAM2P15259 253 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ERVK11-1P61568 191 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 BAMBIQ13145 260 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 OR8G1Q15617 311 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MBNL2Q5VZF2 373 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CLEC18BQ6UXF7 455 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SCCPDHQ8NBX0 429 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF488Q96MN9 340 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CLEC4MQ9H2X3 399 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 LIME1Q9H400 295 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RIMS4Q9H426 269 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PTPRQQ9UMZ3 2332 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TRBV6-6A0A0A6YYG2 114 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CXCL2P19875 107 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GLRA1P23415 457 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF718Q3SXZ3 478 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 UNQ6494/PRO21346Q6UXR6 183 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ELMOD3Q96FG2 381 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FXYD6Q9H0Q3 95 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 Q9N2K0 584 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TMEM100Q9NV29 134 aa15.32■□□□□ 0.04
HLA-DQB1-201ENST00000374943 LAMA5O15230 3695 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 BOD1L1Q8NFC6 3051 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TRAV14DV4A0A0A6YYC5 116 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 A0A1B0GWJ7 208 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PRRG2O14669 202 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PGA5P0DJD9 388 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PI3P19957 117 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TMPRSS3P57727 454 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 NAAAQ02083 359 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF154Q13106 437 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TEX261Q6UWH6 196 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SUMF2Q8NBJ7 301 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 COQ8AQ8NI60 647 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 S100PBPQ96BU1 408 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms