RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TMED4Q7Z7H5 227 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 SLC25A40Q8TBP6 338 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 C17orf50Q8WW18 174 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 RTL8AQ9BWD3 113 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 MLNRO43193 412 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 NKX6-1P78426 367 aaPredicted RBP10.68□□□□□ -0.7
PRPF4-202ENST00000374199 ANKRD55Q3KP44 614 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 OR8G5Q8NG78 346 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 PIK3IP1Q96FE7 263 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 OPN3Q9H1Y3 402 aaPredicted RBP10.68□□□□□ -0.7
PRPF4-202ENST00000374199 TNFSF18Q9UNG2 199 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 MKRN2OSH3BPM6 223 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 SIX6O95475 246 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 MPV17P39210 176 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 NPY4RP50391 375 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 RND3P61587 244 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 SNRPD2P62316 118 aaKnown RBP10.68□□□□□ -0.7
PRPF4-202ENST00000374199 POC1AQ8NBT0 407 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 MRPL30Q8TCC3 161 aaKnown RBP10.68□□□□□ -0.7
PRPF4-202ENST00000374199 BCL2L14Q9BZR8 327 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 TOLLIPQ9H0E2 274 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 ESPL1Q14674 2120 aa10.68□□□□□ -0.7
PRPF4-202ENST00000374199 LINC00862A6NCI5 91 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 OR5H8P0DN80 308 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 GLI4P10075 376 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF250P15622 560 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 HERPUD1Q15011 391 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 SCCPDHQ8NBX0 429 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 PRR7Q8TB68 274 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 EXTL1Q92935 676 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 SCNM1Q9BWG6 230 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 CDH20Q9HBT6 801 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 IL36RNQ9UBH0 155 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ERVH48-1M5A8F1 160 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 CSN2P05814 226 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 CA6P23280 308 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 CFHR2P36980 270 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 TSPAN5P62079 268 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 SPIN3Q5JUX0 258 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 NKAPLQ5M9Q1 402 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 Q6ZR03 302 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 RPRMLQ8N4K4 120 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ABHD17AQ96GS6 310 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 PIGMQ9H3S5 423 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ELL3Q9HB65 397 aaPredicted RBP10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF286AQ9HBT8 521 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 TUBD1Q9UJT1 453 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 PURGQ9UJV8 347 aaKnown RBP10.67□□□□□ -0.7
PRPF4-202ENST00000374199 RTTNQ86VV8 2226 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ATMQ13315 3056 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 TRAPPC2LH3BP13 241 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 B3GALNT1O75752 331 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF585AQ6P3V2 769 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 FAM58AQ8N1B3 248 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 CNEP1R1Q8N9A8 125 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 DYRK2Q92630 601 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
PRPF4-202ENST00000374199 ATP23Q9Y6H3 246 aa10.67□□□□□ -0.7
PRPF4-202ENST00000374199 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 SDCBPO00560 298 aaPredicted RBP10.66□□□□□ -0.7
PRPF4-202ENST00000374199 RHBDL1O75783 438 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 MDH2P40926 338 aaKnown RBP10.66□□□□□ -0.7
PRPF4-202ENST00000374199 OR3A3P47888 321 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF154Q13106 437 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 ALKBH6Q3KRA9 238 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 C11orf87Q6NUJ2 197 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 PCSK4Q6UW60 755 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 UNQ6126/PRO20091Q6UXV3 157 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
PRPF4-202ENST00000374199 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 PLATP00750 562 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 GLRA1P23415 457 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 TSC22D1Q15714 1073 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF497Q6ZNH5 498 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 SUMF2Q8NBJ7 301 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 TP53TG5Q9Y2B4 290 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 BOD1L1Q8NFC6 3051 aa10.66□□□□□ -0.7
PRPF4-202ENST00000374199 IGLV3-9A0A075B6K5 115 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 ANKRD34BA5PLL1 514 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 SLC33A1O00400 549 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 OPCMLQ14982 345 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 HAGHLQ6PII5 290 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 SLC38A6Q8IZM9 456 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 OR1J1Q8NGS3 322 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 HIST1H2AAQ96QV6 131 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 MICU1Q9BPX6 476 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 CHIAQ9BZP6 476 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF701Q9NV72 531 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 POLDIP2Q9Y2S7 368 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 A8MXE2 369 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.65□□□□□ -0.7
PRPF4-202ENST00000374199 S100A11P31949 105 aa10.65□□□□□ -0.7
PRPF4-202ENST00000374199 CD200P41217 278 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms