RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PCDHB16Q9NRJ7 776 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
HDHD3-202ENST00000374180 TRBV23-1A0A0A0MS06 115 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 CCRL2O00421 344 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 ZNF737O75373 536 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 TOX4O94842 621 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 RPL31P62899 125 aaKnown RBP13.18□□□□□ -0.3
HDHD3-202ENST00000374180 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 Q8NFD4 153 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 MUL1Q969V5 352 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 UPRTQ96BW1 309 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 NDUFB11Q9NX14 153 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 MRPS28Q9Y2Q9 187 aaKnown RBP13.18□□□□□ -0.3
HDHD3-202ENST00000374180 CUBNO60494 3623 aa13.18□□□□□ -0.3
HDHD3-202ENST00000374180 TMEM82A0PJX8 343 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 SIRPB1O00241 398 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 DEGS1O15121 323 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 ZNF780AO75290 641 aaPredicted RBP13.17□□□□□ -0.3
HDHD3-202ENST00000374180 OR2H2O95918 312 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 ZNF44P15621 663 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 GPR176Q14439 515 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 SLC22A6Q4U2R8 563 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 C17orf107Q6ZR85 190 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 GDPD3Q7L5L3 318 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 FAM185AQ8N0U4 392 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 OR8H2Q8N162 312 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 OR4M1Q8NGD0 313 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 OR51T1Q8NGJ9 327 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 PPP1R35Q8TAP8 253 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 TBC1D15Q8TC07 691 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 FOXRED1Q96CU9 486 aaPredicted RBP13.17□□□□□ -0.3
HDHD3-202ENST00000374180 UQCC2Q9BRT2 126 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
HDHD3-202ENST00000374180 A0A087WXM4 84 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 PSPNO60542 156 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 FSHBP01225 129 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 MMP9P14780 707 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 SERPINA2P20848 420 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 EPHA1P21709 976 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 LMO1P25800 156 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
HDHD3-202ENST00000374180 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
HDHD3-202ENST00000374180 EDDM3BP56851 147 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 GRK1Q15835 563 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 NEDD8Q15843 81 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 KLF17Q5JT82 389 aaPredicted RBP13.16□□□□□ -0.3
HDHD3-202ENST00000374180 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 AWAT2Q6E213 333 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 Q6P435 159 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 GLIPR1L1Q6UWM5 242 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 LYPD6Q86Y78 171 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 OSR2Q8N2R0 312 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 CHST4Q8NCG5 386 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 TSPAN14Q8NG11 270 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 OR4D6Q8NGJ1 314 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 C19orf12Q9NSK7 152 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 NUP50Q9UKX7 468 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 ST3GAL6Q9Y274 331 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 ATRQ13535 2644 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 A0A0G2JK05 382 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 GTF2F2P13984 249 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 PDCD1Q15116 288 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 TMEM200BQ69YZ2 307 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 PRIMA1Q86XR5 153 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 KIR3DL3Q8N743 410 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 OR4S1Q8NGB4 309 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 TBX15Q96SF7 602 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 OCEL1Q9H607 264 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 VCX3AQ9NNX9 186 aa13.16□□□□□ -0.3
HDHD3-202ENST00000374180 IGHV3OR16-10A0A075B7F0 116 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 TRDV1A0A1B0GX56 115 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 MGST3O14880 152 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 GALP22466 123 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 FPR2P25090 351 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 OR3A1P47881 315 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 IL13RA2Q14627 380 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
HDHD3-202ENST00000374180 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
HDHD3-202ENST00000374180 TRAV40A0A0B4J280 105 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 TRIM64CA6NLI5 447 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 M0R1W7 72 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 SLC33A1O00400 549 aaPredicted RBP13.14□□□□□ -0.31
HDHD3-202ENST00000374180 RBM11P57052 281 aaKnown RBP13.14□□□□□ -0.31
HDHD3-202ENST00000374180 NHLRC3Q5JS37 347 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 C1orf100Q5SVJ3 147 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 GPR157Q5UAW9 335 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 FOXB2Q5VYV0 432 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms