RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 HMSDA8MTL9 139 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 CCL2P13500 99 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 ELOBQ15370 118 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 HEXA-AS1Q9H8Q6 139 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 ACTL6AO96019 429 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 METAP1P53582 386 aa10.21□□□□□ -0.78
VCL-202ENST00000372755 PHIPQ8WWQ0 1821 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 C4AP0C0L4 1744 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 FAM157AC9JC47 383 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SYNGR2O43760 224 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 PEX11BO96011 259 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 DYNLT3P51808 116 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 HMGA2P52926 109 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 FGF8P55075 233 aaPredicted RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 FOXO1Q12778 655 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 C1orf210Q8IVY1 113 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 NUP98P52948 1817 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SEMA7AO75326 666 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 CST2P09228 141 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 CISD3P0C7P0 127 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 LSM6P62312 80 aaKnown RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 CT55Q8WUE5 264 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 NUDT16L1Q9BRJ7 211 aaKnown RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 KCNK15Q9H427 330 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 IGHV1OR15-9A0A0B4J2B8 117 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 HAND1O96004 215 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 P01737 135 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 BSXQ3C1V8 233 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 RHBDD2Q6NTF9 364 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 FAM24BQ8N5W8 94 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 LINC01555Q8NAE3 123 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 OR8B12Q8NGG6 310 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 Q8WTZ3 238 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 ZNF385DQ9H6B1 395 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 LHX9Q9NQ69 397 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 DDX60Q8IY21 1712 aaKnown RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 CDK2AP1O14519 115 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 HES3Q5TGS1 186 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 CTLA4P16410 223 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SOX8P57073 446 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SNRPEP62304 92 aaKnown RBP10.2□□□□□ -0.78
VCL-202ENST00000372755 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 LRP11Q86VZ4 500 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 ZNF547Q8IVP9 402 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 TUSC5Q8IXB3 177 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SCMH1Q96GD3 660 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 ABHD14AQ9BUJ0 271 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 PLA2G2FQ9BZM2 168 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 RNF7Q9UBF6 113 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 SERGEFQ9UGK8 458 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 PRNDQ9UKY0 176 aa10.2□□□□□ -0.78
VCL-202ENST00000372755 TTRP02766 147 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 TMEM33P57088 247 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 OR10G8Q8NGN5 311 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 OR2T10Q8NGZ9 312 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 RND1Q92730 232 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 MAP1LC3CQ9BXW4 147 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 NXF2Q9GZY0 626 aaKnown RBP10.19□□□□□ -0.78
VCL-202ENST00000372755 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 TMPRSS2O15393 492 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 GZMHP20718 246 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ACAA2P42765 397 aaKnown RBP10.19□□□□□ -0.78
VCL-202ENST00000372755 SLC25A40Q8TBP6 338 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 NRXN3Q9Y4C0 1643 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 CTDSPLO15194 276 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 CD40P25942 277 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 SMAGPQ0VAQ4 97 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 Q6ZN92 141 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ZNF683Q8IZ20 524 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 RPS4Y2Q8TD47 263 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 DTD1Q8TEA8 209 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 TRAV34A0A0B4J273 112 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 KIAA0040Q15053 153 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 IL22RA2Q969J5 263 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ANGPTL4Q9BY76 406 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 SLC52A3Q9NQ40 469 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 TNFRSF19Q9NS68 423 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ANKRD12Q6UB98 2062 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 MEX3AA1L020 520 aaKnown RBP10.19□□□□□ -0.78
VCL-202ENST00000372755 C11orf94C9JXX5 98 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 HPXP02790 462 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 PMELP40967 661 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 ZIC1Q15915 447 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 CLPPQ16740 277 aaPredicted RBP10.19□□□□□ -0.78
VCL-202ENST00000372755 HLA-DRB5Q30154 266 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 PRSS41Q7RTY9 318 aa10.19□□□□□ -0.78
VCL-202ENST00000372755 B4DEV8 164 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MFNGO00587 321 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 HIST1H1EP10412 219 aaKnown RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 ERVS71-1P61550 626 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 POLR2GP62487 172 aaKnown RBP eCLIP10.18□□□□□ -0.78
VCL-202ENST00000372755 RTP5Q14D33 572 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 SSX1Q16384 188 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 XAF1Q6GPH4 301 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 FAM109BQ6ICB4 259 aaPredicted RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 PWWP2BQ6NUJ5 590 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms