RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MMP9P14780 707 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 KIR2DS2P43631 304 aa13.71□□□□□ -0.22
GTF3C4-201ENST00000372146 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 OR52N5Q8NH56 324 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 IGKV6D-41A0A0C4DH26 115 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 A0A1W2PR80 420 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 PLPPR5Q32ZL2 321 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 OTPQ5XKR4 325 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 ZNF788Q6ZQV5 615 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 LURAP1LQ8IV03 231 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 SAP30LQ9HAJ7 183 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 RECKO95980 971 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 SBK3P0C264 359 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 HOXA6P31267 233 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 PRSS54Q6PEW0 395 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 PLPPR2Q96GM1 343 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 SFT2D2O95562 160 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 DUSP5Q16690 384 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 SLC48A1Q6P1K1 146 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 OR5A1Q8NGJ0 315 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 UBE2L6O14933 153 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
GTF3C4-201ENST00000372146 FAM157CP0CG43 387 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 ANKRD34AQ69YU3 496 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 GBGT1Q8N5D6 347 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 USP3Q9Y6I4 520 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 GBF1Q92538 1859 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 CXCL3P19876 107 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 PERPQ96FX8 193 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 ARRDC5A6NEK1 342 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 CTAG1AP78358 180 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 FIGNL2A6NMB9 653 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 FCGR3BO75015 233 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 CXorf1O96002 111 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 TMEM204Q9BSN7 226 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 WNK2Q9Y3S1 2297 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 SNRNP40Q96DI7 357 aaKnown RBP13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 MS4A8Q9BY19 250 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 TAAR3PQ9P1P4 343 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 FUT6P51993 359 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 IGFBP7Q16270 282 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 OR4P4Q8NGL7 312 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 RPS23P62266 143 aaKnown RBP13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 ST6GAL2Q96JF0 529 aa13.69□□□□□ -0.22
GTF3C4-201ENST00000372146 GSTZ1O43708 216 aaPredicted RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 DHRS3O75911 302 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 GPX2P18283 190 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 VMA21Q3ZAQ7 101 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 SPATA46Q5T0L3 261 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 SGMS2Q8NHU3 365 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 MBNL1Q9NR56 388 aaKnown RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 F5P12259 2224 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 ABLIM3O94929 683 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 LGALS3P17931 250 aaKnown RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 LIM2P55344 173 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 SYS1Q8N2H4 156 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 SIGLEC5O15389 551 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 CIRBPQ14011 172 aaKnown RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 PRSS2P07478 247 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 INSL4Q14641 139 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 LIAT1Q6ZQX7 453 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 UBTD2Q8WUN7 234 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 R3HDM4Q96D70 268 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 LINC00862A6NCI5 91 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 RER1O15258 196 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 EDN1P05305 212 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 TEX29Q8N6K0 151 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 CYB561D1Q8N8Q1 229 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 ABCA4P78363 2273 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 C1QTNF9BB2RNN3 333 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 CTAG2O75638 210 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 DUSP2Q05923 314 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 IL36GQ9NZH8 169 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 ATP23Q9Y6H3 246 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 RUNX3Q13761 415 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 PRNTQ86SH4 94 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 SLC17A5Q9NRA2 495 aa13.68□□□□□ -0.22
GTF3C4-201ENST00000372146 TMEM38BQ9NVV0 291 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms